Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01099 ATGGGGAGAAGCCCTTGCTGCTCAAAAGAGGGTTTGAACAGAGGTGCTTGGACTGTTCATGAAGACAAGATCCTCACTGATTACATCAAACTCCATGGTGAAGGAGGATGGAGAAACCTTCCCAAAAGAGCAGGTTTGAAGAGATGCGGCAAGAGTTGCAGGCTGAGATGGCTGAATTATCTTAGACCAGATATAAAGAGAGGCAATATCTCCCCAGATGAAGAAGAGCTTATTATCAGGCTTCACAAGCTGTTGGGTAACAGATGGTCCCTAATCGCAGGAAGGCTTCCAGGGCGAACagacaatgaaataaaaaactacTGGAATACCAACTTAGGCAAAAAGGTTAAAGACCATCACCAACCCAACAACACTTCATCTCGAAAACTCTCTGTTCAACCAAATGAAAACAACTCAAAGCCAACAAAGCGGGAAGCCAAGGTTGTCCGTACAAAGGCAACAAGGTGCTCTAAGATATTCATAAACCTACCTCTTCACTCTTCATTCCAGTTCCAGAACAATTCATCaaacacaaaagaagaaacagtaGAAGCAGAGCCATTACCAGTGGATGCTTCTGCTGCAGCCACtaacaataatgataataacattTCAGCAGCTGGTTTCCAAATGGAACTTGACAAGTTCGATATTAATGGGTTTTTGTCGTTTAGTGCCGGAGAAGAtcacgaacttggtccagatTTGCTGGTAGATTTTAACATGGGGGAGATATGCTTCTCTGATCTTCTCAACTCGGATTTAATCTCAGATGTACAGTGTGATTTCAGCAACAGTAACAATAACAGCCAAGAGCCATCGCTGTCTCCATCAGAAAAAGAGCCGTTGCTGTTCTCCGATGAGCTTCTCAAGGATCGGACTCAACAATTTTGCCGAAACAAATGTGGCTA 911 0.405 MGRSPCCSKEGLNRGAWTVHEDKILTDYIKLHGEGGWRNLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNISPDEEELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGKKVKDHHQPNNTSSRKLSVQPNENNSKPTKREAKVVRTKATRCSKIFINLPLHSSFQFQNNSSNTKEETVEAEPLPVDASAAATNNNDNNISAAGFQMELDKFDINGFLSFSAGEDHELGPDLLVDFNMGEICFSDLLNSDLISDVQCDFSNSNNNSQEPSLSPSEKEPLLFSDELLKDRTQQFCRNKCG 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01099 303 MobiDBLite consensus disorder prediction 125 139 - -
Bva05g01099 303 Gene3D - 70 149 - -
Bva05g01099 303 CDD SANT 16 61 IPR001005 -
Bva05g01099 303 SMART sant 66 114 IPR001005 -
Bva05g01099 303 SMART sant 13 63 IPR001005 -
Bva05g01099 303 MobiDBLite consensus disorder prediction 112 146 - -
Bva05g01099 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bva05g01099 303 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bva05g01099 303 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bva05g01099 303 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 268 - -
Bva05g01099 303 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Bva05g01099 303 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva05g01099 303 CDD SANT 71 112 IPR001005 -
Bva05g01099 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bva05g01099 303 PANTHER TRANSCRIPTION FACTOR TT2 1 268 - -
Bva05g01099 303 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva05g01099 303 Gene3D - 14 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01099 Bva-Chr5 5650037 5651288 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01099 1 186 MYB Transcription Factor Family AT4G38620 53.763 1.01e-61 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva05g01099 Myb_DNA-binding 1.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01099 K09422 - gmx:100802704 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01099 05 5650037 5651288 Bva05g01099 05 5650037 5651288 ECH