Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01098 atggGAAGGAAGCCTTGTTGTAAGGACGGGGTAAACAAGGGTGCCTGGTCTGCAAAGGAAGACAGGATCCTCACAAACTACATTAAAGTCCACGGAGAAGGCAAATGGAGAGACCTTCCCAAAAGAGCTGGCTTGAATCGATGTGGAAAGAGTTGCAGACTCCGATGGTTGAATTATCTCAGACCAGACATCAAGAGAGGTAACTTTTCTGTGGACGAGGAAGATCTTATCATCAAATTGCATAAACTCATTGGCAACAGATGGTCTCTAATCGCGGGGCGATTACCAGGAAGAACCGATAACGAGATCAAGAATCACTGGAACTGCTACTTgagcaagaaaataaaggcGAAGCAGAGCCATATCCGGCCTCAAGACCCAAGTAATGGAGATTCtagcaaacaaaaaaacagCTCCTCTCAGGTTAAAGAAGCAACAGATCAAGCAAAACCAGATGACGGTTCTCACCCAGTGATTCGAACAAGAGCAGTGAGGTGCACAAAGTTTATCGATGTGCCAATGCCTGATGCAGCCAATGATTCAGCAGCGAACGCGACAAATTCAGTTACCCCAGAAGGCGAGGAAAGCCAGAGGCCATCTTTAACTATCCCAAACAGTGACACTAACATTAACAGCCCTGGTTTCTTTCTGGATTTTGACACTAGCGACATTGACCTGCTGCTGATGCCAGATCCTGTGGATGCTAGCGGCCAATGCAGTAGCTACCAAATCAATGGTCAGTTTCAGGATCATTTACCAAGAGCAGACCATTTTGCAGATGAAACCATGATAGTTAACAATGATGATTCAGTGTATGAAGCAAGGTCGTCTGGGAATTGGATGGTGGGTGGTTTGTTTCAGCAGAATGAAGGTCCAATGGATCTTTTTACCATTCTGCACTCAGCTCATCAGTATTTTTA 920 0.4359 MGRKPCCKDGVNKGAWSAKEDRILTNYIKVHGEGKWRDLPKRAGLNRCGKSCRLRWLNYLRPDIKRGNFSVDEEDLIIKLHKLIGNRWSLIAGRLPGRTDNEIKNHWNCYLSKKIKAKQSHIRPQDPSNGDSSKQKNSSSQVKEATDQAKPDDGSHPVIRTRAVRCTKFIDVPMPDAANDSAANATNSVTPEGEESQRPSLTIPNSDTNINSPGFFLDFDTSDIDLLLMPDPVDASGQCSSYQINGQFQDHLPRADHFADETMIVNNDDSVYEARSSGNWMVGGLFQQNEGPMDLFTILHSAHQYF 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01098 306 Gene3D - 67 144 - -
Bva05g01098 306 CDD SANT 68 111 IPR001005 -
Bva05g01098 306 PANTHER MYB TRANSCRIPTION FACTOR 1 228 - -
Bva05g01098 306 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Bva05g01098 306 SMART sant 12 62 IPR001005 -
Bva05g01098 306 SMART sant 65 113 IPR001005 -
Bva05g01098 306 MobiDBLite consensus disorder prediction 122 145 - -
Bva05g01098 306 Gene3D - 13 65 - -
Bva05g01098 306 MobiDBLite consensus disorder prediction 118 158 - -
Bva05g01098 306 CDD SANT 15 60 IPR001005 -
Bva05g01098 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Bva05g01098 306 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Bva05g01098 306 MobiDBLite consensus disorder prediction 180 207 - -
Bva05g01098 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Bva05g01098 306 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Bva05g01098 306 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Bva05g01098 306 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Bva05g01098 306 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 228 - -
Bva05g01098 306 MobiDBLite consensus disorder prediction 175 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01098 Bva-Chr5 5636207 5637572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01098 1 144 MYB Transcription Factor Family AT4G34990 61.379 2.04e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva05g01098 Myb_DNA-binding 2.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01098 K09422 - tcc:18588308 249.98