Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01092 ATGGAAGCAGGAAAAGGAGCGGGAGACAAGATGGAACCTAAGAACGAACTCATTCTGCAAATTTCTGAAAAGGAACAAGCTTTCTacgcaaagaaagaaagcaaggaTTTTGAAGGTTCCTCTCCTGTAATCGAAAGAACTTATAGTTCTCAGCCAAATAGCCAGATGGGTTCTTCGTTCAGAGGGTTCAGAGAGTCAGGTACTGAACTAACAGAGATTGAAAATCTCAGGAGCAGGATTCAAGTTTCCTCAAGTACAAGCTCGCCTTCGCCGGAGATGAAAAACTTGACGCCAAAATCGGGTAAGCCGCCGAAAATCCCCGCAGAGGCTATTACACGACGGCGGTCACTTGTGAGGTCGGAGTTTTCCAAGCCAAAATCGAGATTGGTGGAGCCGCCATATCCAAGTGATGCCAAGGTGCTTGAGGAAAAGGCCCAATCGATGAATTCTAATTTATCTGATAAGAATTCTCCTACTTTGGCTTCTcctaataacaaaattacaacTACTACTCCAAGGGGTACAAATACAGTTCCTGTTACTCCAAGAACGCCCTTGATTGGCACACCTgtagatgaagatgatgatgaagaagtaTACAAGACAGCAGATCTACGAGTGAGCCGGAGACCAGGTAAGAAGTGGAAATTTATGGTTTTGATTGAGTGGACTGCTTTTGTCTGTATCATGGGGTTTTTGATTGCAAGCTTGACTATCCATAAGTTACATGACAGTGTAATTTGGGGTTTGGGATTATGGAAATGGTGTGTTCTGGTGTTGGTTATCCTCTGTGGTAGAATGGTCACAGAGTggtttatgaatattttggtaTTCTTGATTGAAAGAAACTTCTTGTTTAAAAAGAAGGTTCTGTATTTTGTTTATGGTCTGAAGAAGAGTGTTCAGGCCTTTATTTGGTTAAGCTTGGTTCTACTGGCATGGGGTCTATTGTTTAACCGTGGAGTCAAACGATCCAAACAGACTACTAAGATTCTCAATCATATAACTAGAGCCCTTGCTTCTTGTCTTATTGGGGCGGCTATATGGCTACTAAAAACATTGTTGATAAAGCTGTTGGCTTCTTCTTTCCAATGCACCAGATTCTTTGACAGGATTCAAGAATCATTATTTCATCAGTACATTCTGCATACTCTCTCGGGGCCTCCATTGATGGAGATGGCTGAAATGGTAGGAAAAACTGCAAGCGCTGGCCAACTTAGTTTCAGGACTAATAGAGACAATGAAGGGAGCAAAGAAGAGGTCATTGATGTAGACAAGCTCAAAAAGATGAAACAAGAGAAAGTTTCAGCTTGGACCATGAAAGGCTTGATTAACGTGATAAGGAGTTCTGGACTGTCTACCATCTCCAATACATTAGTGAGTTTTGATGAAGACGAGGGTGAGCAGAATGACAAGGAAATTACTAGTGAGTGGGAAGCAAAAGCAGCTGCTTATAGAATTTTCCAGAATGTTGCAAAGCCAGGAAACAAGTACATTGATGAGGAGGACCTTTTGCGCTTcatgaaaagagaagaggtGGAGAATGTGCTTCCACTATTTGAAGGAGCATCTGAAACTGGAAAAATCAAGAGGAAGTCTCTGAAAAATTGGCTGTTGAAAGTCTACCTCGAACGTAAATCACTGGTACATTCCTTAAATGATACCAAAACGGCCGTCGATGAGTTGGACAAGCTCGCTTCAGTGGTGGTCCTTGTTGTGATTGTTATTGTATGGCTACTTTTGATGGGATTCTTGACAACCAAGGTGCTCGTCTTCATTTCATCTCAACTTCTCCTTGTGGTGTTTATATTTGGTAGCACAGCTAAGACAGTGTTTGAAGCCATCATATTTGTTTTCGTGATGCACCCATATGATGTTGGGGATCGTTGTGTCATTGATGGTGTGCAGATGGTTGTAGAAGAGATGAATATATTGAGTACAGTCTTCTTGAGATATGACAATGAAAAGATATTCTATCCAAATTCAGTTCTGGCAACCAAACCAATCAGCAACTTCTACAGAAGCCCAGATATGAGTGATTCAGTTGAATTTGCCGTTGATGTTTCTACCTCAATTGAGACTATTGGAGCTTTAAAAGCTAGAATAAAAGCataCTTGGAAAGTAGGCCACAACACTGGCGTCCTGGCCATAGTTTAATCGTTAAGGACATTGAGAACGTAAACAAGATGAAAATGGCTCTATATATCAATCATACCATGAATTTTCAGAATTATGGAGATAAAGTTAGCAGAAGATCTGACTTAGTTCTGGAGTTGAAGAACATTTTTGAAGATCTTAATATCAAGTATCATCTACTGCCACGAGAAGTTCACCTCAGTTGCGCAGCACCAGCAACCTCCACGGGATTACCAGTTTGGAGATG 2384 0.3964 MEAGKGAGDKMEPKNELILQISEKEQAFYAKKESKDFEGSSPVIERTYSSQPNSQMGSSFRGFRESGTELTEIENLRSRIQVSSSTSSPSPEMKNLTPKSGKPPKIPAEAITRRRSLVRSEFSKPKSRLVEPPYPSDAKVLEEKAQSMNSNLSDKNSPTLASPNNKITTTTPRGTNTVPVTPRTPLIGTPVDEDDDEEVYKTADLRVSRRPGKKWKFMVLIEWTAFVCIMGFLIASLTIHKLHDSVIWGLGLWKWCVLVLVILCGRMVTEWFMNILVFLIERNFLFKKKVLYFVYGLKKSVQAFIWLSLVLLAWGLLFNRGVKRSKQTTKILNHITRALASCLIGAAIWLLKTLLIKLLASSFQCTRFFDRIQESLFHQYILHTLSGPPLMEMAEMVGKTASAGQLSFRTNRDNEGSKEEVIDVDKLKKMKQEKVSAWTMKGLINVIRSSGLSTISNTLVSFDEDEGEQNDKEITSEWEAKAAAYRIFQNVAKPGNKYIDEEDLLRFMKREEVENVLPLFEGASETGKIKRKSLKNWLLKVYLERKSLVHSLNDTKTAVDELDKLASVVVLVVIVIVWLLLMGFLTTKVLVFISSQLLLVVFIFGSTAKTVFEAIIFVFVMHPYDVGDRCVIDGVQMVVEEMNILSTVFLRYDNEKIFYPNSVLATKPISNFYRSPDMSDSVEFAVDVSTSIETIGALKARIKAYLESRPQHWRPGHSLIVKDIENVNKMKMALYINHTMNFQNYGDKVSRRSDLVLELKNIFEDLNIKYHLLPREVHLSCAAPATSTGLPVWR 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01092 794 Pfam Mechanosensitive ion channel 564 769 IPR006685 GO:0016020|GO:0055085
Bva05g01092 794 Gene3D - 623 672 IPR023408 -
Bva05g01092 794 SUPERFAMILY Sm-like ribonucleoproteins 613 672 IPR010920 -
Bva05g01092 794 MobiDBLite consensus disorder prediction 143 183 - -
Bva05g01092 794 MobiDBLite consensus disorder prediction 32 188 - -
Bva05g01092 794 MobiDBLite consensus disorder prediction 108 126 - -
Bva05g01092 794 PIRSF Memb_At2g17000 7 791 IPR016688 -
Bva05g01092 794 MobiDBLite consensus disorder prediction 73 95 - -
Bva05g01092 794 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 14 782 IPR016688 -
Bva05g01092 794 MobiDBLite consensus disorder prediction 43 65 - -
Bva05g01092 794 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 14 782 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01092 Bva-Chr5 5605022 5608886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01092 86 780 Mechanosensitive Ion Channel Family AT5G12080 54.857 0.0 767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01092 K22048 - qsu:112023488 1054.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01092 05 5605022 5608886 Bva05g01092 05 5605022 5608886 ECH