Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01088 ATGCTGACATGCATAGCTCGTCCAAAGAAACCGGGGAATGAAAGTCAGCCCGATGAATCGGACTCTGACAACCCAGAAAAAACTCAAGCCATCAAATCCCTCACTTCTCAGCTGAAGGACATGGCACTGAAGGCATCGGGGGCATACAAGCATTGCAGCCCATGCACGGGGCCGGGGACACAGGGACGAATCCGGAGCAATATCGAATCCGATGGCGATTCGGATCGGTTCCCATGGTCGTACCGGAGAACGGGGAGCTCAAGCTCGACGACGACGAGAACATGGGGAAAGGAGATGGAGGCGAGGCTGAAGGGGATTTCAAGCGGAGAAGGGACGCCGAACTCCGCCAGTGGCCGCCGGGTTGAACCGGTGGTGCTGTTCGTTGAAGAGAACGAACCGAAAGAGTGGGTGGCGCAGGTGGAGCCAGGCGTTTTAATCACTTTCGTTTCGCTTCCGCGTGGCGGGAATGATCTGAAGCGAATACGGTTCAGTCGGGAGATGTTCAACAAACTGCAAGCTCAAAGATGGTGGGCAGAGAACTATGACAGGGTCATGGAACTTTACAATGTTCAAAGGATGAATCGCAATGCTTTCCCTCTTCCAACGCCGCCGAGATCTGAAGATGAGAGCTTAAAGCTTGAATCAGCAGAAGAAAGTCCTGTAACACCTCCACTAACCAGAGAACGACTACCTCGAAATCTATACCGTCCATCGGGGTTGGGAATGGGATATTCATCGTCAGATTCGTTTGACCATCACTCAATGCAATCCCGGCATTTCTTTGACTCTGGTGGTCTCAACTCAACCCCTAAAGTGTCCACTATTAGCGCAGCCAAGACAGAGACATCAATGGACACTTCAATGAGAAGTAGCTCATCCAGGGAAGCTGATCGCTCATGTGATGTATCAATCAGCAATGCCAGTGACCTCGAAACTGAATGGGTTGAACAAGATGAACCTGGGGTTTATATTACCATCAGAGCACTACCAGGTGGCAAAAGAGAGCTCAGAAGAGTCAGATTCAGCCGAGAAAGATTTGGGGAAGTGCATGCTAGATTATGGTGGGAAGAGAACAGAGCTAGAATACATGAACAATACTTATG 1103 0.5041 MLTCIARPKKPGNESQPDESDSDNPEKTQAIKSLTSQLKDMALKASGAYKHCSPCTGPGTQGRIRSNIESDGDSDRFPWSYRRTGSSSSTTTRTWGKEMEARLKGISSGEGTPNSASGRRVEPVVLFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKLQAQRWWAENYDRVMELYNVQRMNRNAFPLPTPPRSEDESLKLESAEESPVTPPLTRERLPRNLYRPSGLGMGYSSSDSFDHHSMQSRHFFDSGGLNSTPKVSTISAAKTETSMDTSMRSSSSREADRSCDVSISNASDLETEWVEQDEPGVYITIRALPGGKRELRRVRFSRERFGEVHARLWWEENRARIHEQYL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01088 367 MobiDBLite consensus disorder prediction 80 96 - -
Bva05g01088 367 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 367 IPR044532 -
Bva05g01088 367 Pfam Transcription factor regulating root and shoot growth via Pin3 134 188 IPR013591 -
Bva05g01088 367 Pfam Transcription factor regulating root and shoot growth via Pin3 311 366 IPR013591 -
Bva05g01088 367 ProSiteProfiles BRX domain profile. 134 189 IPR013591 -
Bva05g01088 367 MobiDBLite consensus disorder prediction 54 96 - -
Bva05g01088 367 Pfam Transcription factor BRX N-terminal domain 26 55 IPR027988 -
Bva05g01088 367 MobiDBLite consensus disorder prediction 1 31 - -
Bva05g01088 367 MobiDBLite consensus disorder prediction 279 300 - -
Bva05g01088 367 MobiDBLite consensus disorder prediction 199 238 - -
Bva05g01088 367 ProSiteProfiles BRX domain profile. 312 367 IPR013591 -
Bva05g01088 367 MobiDBLite consensus disorder prediction 12 26 - -
Bva05g01088 367 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01088 Bva-Chr5 5587969 5592569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01088 1 367 Major Intrinsic Protein MIP AT1G31880 45.195 8.89e-93 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01088 - - gmx:100794109 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01088 05 5587969 5592569 Bva06g00555 06 5885341 5890868 BWGD
Bva05g01088 05 5587969 5592569 Bva05g01088 05 5587969 5592569 ECH