Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01086 ATGAGGCCAACTCTCTTGTTGAACCATCCTGATAACGAGTTAAATTGTCCTCAAGTTGATCACTCAATGGCTCGTGTTCCTTACCCTTATGCTGATCCTGTTTTTGGTGGTTCATTAGCTACATATGGACCACAGTTTATTACTCAACCCCAAATGGTGCCCCAGATGTTGGGAATGTCATCCACAAGAGTTGCATTACCGCTTGATCTTGCAGAAGATGGACCCATTTATGTCAATGCAAAACAATATCATGGTATACTGAGAAGGAGACAATCACGGGCAAAGATGGAGGCTCAAAACAAACTCATCAAAAGCCGCAAGCCATATCTTCATGAGTCCCGACACCTTCATGCTTTAAAGAGGGTTAGAGGATCTGGGGGACGCTTTCTCGGCACTAAACAGCTTCAAGAGCCTAATCCAGAACTTGTCTCCGGTGCTCATTCTGGCTCAGACTGTgtcaaattatatcaaaagaaagatgCATCAGAGGTGGAAAGTCATCCATCAAGAAATGGCGAAAATGCATCTTCTATTTCAACCTGCTCTGACATGACAAGCTTGTCCTGTAACAGTGTCAATTTCAGGCAGCCAGAGCGCAAGTTCTTGGGCAACTCTTCAAACATTGGAGGAGCATCACAGTGGAGTGGGGGACTCACCTTTAATGGGTCCCAGCAACGTGCTTCAATAGTCCGGTG 695 0.4432 MRPTLLLNHPDNELNCPQVDHSMARVPYPYADPVFGGSLATYGPQFITQPQMVPQMLGMSSTRVALPLDLAEDGPIYVNAKQYHGILRRRQSRAKMEAQNKLIKSRKPYLHESRHLHALKRVRGSGGRFLGTKQLQEPNPELVSGAHSGSDCVKLYQKKDASEVESHPSRNGENASSISTCSDMTSLSCNSVNFRQPERKFLGNSSNIGGASQWSGGLTFNGSQQRASIVR 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01086 231 MobiDBLite consensus disorder prediction 129 148 - -
Bva05g01086 231 ProSiteProfiles NF-YA/HAP2 family profile. 72 132 IPR001289 GO:0003700|GO:0006355
Bva05g01086 231 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 1 217 IPR001289 GO:0003700|GO:0006355
Bva05g01086 231 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 75 129 IPR001289 GO:0003700|GO:0006355
Bva05g01086 231 SMART cbf3 71 132 IPR001289 GO:0003700|GO:0006355
Bva05g01086 231 PRINTS CCAAT-binding transcription factor subunit B signature 106 129 IPR001289 GO:0003700|GO:0006355
Bva05g01086 231 PRINTS CCAAT-binding transcription factor subunit B signature 75 97 IPR001289 GO:0003700|GO:0006355
Bva05g01086 231 Gene3D - 72 134 - -
Bva05g01086 231 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR 1 217 - -
Bva05g01086 231 MobiDBLite consensus disorder prediction 159 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01086 Bva-Chr5 5575638 5578581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01086 22 194 CCAAT-HAP2 Transcription Factor Family AT1G17590 49.724 7.59e-44 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Bva05g01086 CBFB_NFYA 8.4e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01086 K08064 - gmx:100793856 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01086 05 5575638 5578581 Bva05g01086 05 5575638 5578581 ECH