Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01080 ATGGTTGCACCCGTTAACATCATTGTAGGTTCTCATGCCTGGGTTGAAGATTCAGCACAAGCATGGATTGGTGGAGAAGTGTTTAAAATCAGTGGTGAAGAAGTTTATGTTCGCACCGCAGATGGGAAAACAGTTGTCACAAATATCTCCAAAGCTTTCCCCAAGGATAATGAAGCTCCTCCAGGAGGTGTAGATGACATGACGAAATTGTCATATTTGCATGAACCTGGAGTTCTACATAACTTGGCAACTAGATATGAACTCAATGAAATCTatACATATACTGGAAACATCCTGATTGCCATAAACccatttcaaagattaccacATCTATATGATAGTCACATGATGGAACAATACAAAGGAGCTGCATTTGGAGAGTTGAGTCCCCATGTTTTTGCTGTTGCAGATGTTGCATACAGGGCAATGATCAATGAGGGAAAAAGCAACTCAATCCTGGTTAGTGGAGAAAGCGGTGCCGGTAAGACTGAGACAACAAAGATGCTCATGCGATATCTTGCATACCTCGGAGGTCGATCTGGTGTAGAAGGGCGGACAGTTGAACAGCAAGTCTTAGAATCTAATCCAGTGCTTGAAGCATTTGGAAATGCCAAAACAGTTAGAAATAACAACTCCAGTCGTTTTGGTAAATTTGTTGAGATTCAATTTGACAACAAGGGGAGGATATCTGGCGCAGCTATACGAACTTACCTGCTTGAAAGGTCTCGTGTTTGCCAAATTTCCGATCCAGAAAGAAACTACCATTGCTTTTACCTTCTTTGTGCAGCACCAGCTGAGGAAAAAGAGAGGTATAAATTAGGAAGCCCTAGCTCCTTCCATTACTTGAATCAGTCCAACTGCTACCAGCTGGATGGAGTGGACGATTCACACGAGTACCTTGCAACCCGAAGGGCAATGGATATCGTTGGAATCAGTGAGGAAGAGCAGGAGGCAATTTTTAGGGTTGTTGCAGCCATTCTGCACCTTGGAAATATTGAATTTGCAAAAGGAGAGGAGATTGACTCTTCTGTCATCAAGGACGATAAGTCTAGATTCCATCTGAATACGACTGCTGAACTTCTTAAATGTGATGCTAAGAGCTTGGAAGATGCACTAATCAAGCGTGTGATGGTGACACCTGAGGAGGTTATTACAAGAACCCTTGATCCTGTCGCAGCTGTTGGTAGCAGGGATGCATTAGCTAAAACCATTTATTCACGTTTATTTGATTGGCTTGTGGAGAAAATTAACATTTCGATTGGGCAAGATCCAAATTCAAAATCCATTATAGGAGTTCTTGATATCTATGGGTTTGAAAGTTTTAAGTTCAATAGTTTTGAACAGTTCTGCATCAATTTCACCAATGAAAAGCTGCAACAGCATTTCAATCAGCATGTCTTCAAAATGGAACAAGAAGAGTATACTAAAGAAGAGATCAATTGGAGCTACATTGAATTTGTTGATAACCAAGATATGCTGGATCTAATTGAGAagAAACCTGGAGGAATAATTGCACTTCTTGATGAAGCATGTATGTTTCCTAAGTCCACACATGAAACATTTGCTCAGAAGTTGTACCAGACATTCAAAAACAACAAGCGCTTCATCAAACCTAAACTTTCTCGAACTAGTTTTACCATAAGTCATTATGCAGGGGAGGTGACATATCTGGCTGATATGTTTCTCGATAAAAACAAGGATTATGTGGTCGCAGAACATCAGGATCTGCTGACAGCCTCAAAATGCTCTTTTGCGGCAGGTCTATTCCCCGCTCTTCGGGAGGATTCATCAAAGTCATCAAAGTTCTCCTCTATTGGGTCCCGTTTCAAGTTGCAACTTCAATCTTTGATGGAGACCCTAAATTCAACAGAACCGCACTATATCAGATGTGTGAAGCCAAACAATGTCCTCAAGCCTGCCATTTTCGAGAATGTCAATATTATCCAACAATTGCGCTGCGGTgGTGTTCTTGAGGCAATTAGAATCAGCTGTGCTGGATATCCTACCAGGCGGACCTTTTATGAGTTTCTGAATCGATTTGGTGTTCTTGCACCTGAAGTTCTGGAGGGAAATTATGATGACAAGGTTGCATGCCAAATGGTTCTGGATAAAATGGGTTTGAAAGGATATCAGATAGGCAAAAAAAAGGTTTTCCTAAGAGCTGGTCAGATGGCTGAGTTGGATGCAAGGCGAGCAGAGGTTCTTGGAAATGCAGCCAGAATCATCCAGAGGCAAATACGTACCCATATTGCACGCAAGGAGTTTGTTGAATTGCGACAAGCTGCAATTTGTTTGCAATCTAATTTGCGAGgcATATTGGCCCGGGAGCTTTATGAGCAGTTGCGCCGTGAAGCAGCAGCTCTGAGAATAGAAAAGCACTTTAGAGGACACGTTGCCAGGAAATCTTACTTGACAACGAGATCATCTGCAATCACCTTACAGACTGGTTTAAGGGCTATGAAAGCTCGCAATGAATTTAGATTTAGAAAGCAGACAAAGGCTGCAATTCTTGTTCAGGCTCATTTGCGTCGGCACATTGCATGTTCTTATTATAAAAGGTTGCAGAAGGCTGCAATTGTTACTCAGTGTGGTTGGAGACGAAGGGTTGCTAGGAGGGAACTCAGAAAGCTTAAAATGGCTGCAAGAGAAACAGGGGCCCTTAAAGAAGCAAAGGACAAACTTGAAAAGCGCGTTGAAGAACTTACATGGCGTTTACAAATTGAGAAGCGTTTGAGAACTGATTTCGAAGAGGaaaaaacacaagaaattgCTAAGTTACAGGATGCTTTGCATGCAATGCAAATGCAACTAGAAGAAGCAAATGCCAATGTCATCAAAGAACGTGAGGCTGCTCGGAAAGCCATTGAAGAAGCACCTCCAGTTATTAAGGAGACTCCTGTTATGGTTCAAGATAATGAAAAGATTAATTCCTTAATGGCTGAGGTCAATAGTATGAAGGAATCACTGCTATTGGAAAGACAAGCTGCAGAAGAAGCGAGGAAAGCTCGGGTGGAAGTGGAGGCTAGAAATTCAGAGTTGGTTAAAAAACTTGAAGATTCTGAGCGCAGAGTGGATCAACTCCAGGAATCGGTTCAGAGATTAGAAGACAAAGTTTCTAATATGGAGTCAGAAAATCAAGTTCTTCGCCAGCAAGCACTGACTGTATCGCCAACTGGGAAGGCTCTCTCTGTAAGACCAAAGACAGTGATAATTCAGAGGACACCAGAGAATGGGAGTGCTCTAAATGGGGAAGTAAAGATGGCACCAGATATGACTCTTGCCGTATCAAATGTACGTGAGCCTGAATCTGAGGGCAAACCACAAAAATCTCTTAACGAGAAGCAGCAAGAAAACCAGGAATTGTTGATTAGATGCATATCACAAGATTTAGGTTTTTCTGGGGGCAAGCCAGTCACCGCTTGTCTCGTATATAAATGCCTTCTTCATTGGAGGTCTTTTGAAGTTGAAAGAACAACTGTTTTTGACCGTGTCATTCAAACAATAGCTTCAGCGGTGGAGGTCCAGGATAATACCGATGTATTAGCATATTGGTTGTCTAATACATCTACTTTGTTGTTGCTGCTTCAACGCACTCTAAAAGCGAGTGGAGCAGCTAGCTTAACACCTCAACGGCGGAGAACAACGTCAGCTTCGCTATTTGGAAGAATGTCACAAGGGTTAAGGGGATCTACACAAAGTGCTGGATTATCATTTCTAAATGGCCGAGGGCTTGGTAGAGTGGATGATTTACGACAAGTTGAGGCAAAATATCCAGCACTGCTGTTTAAGCAGCAGCTCACTGCCTTCCTTGAAAAAATATACGGAATGATAAGAGACAACCTGAAAAAAGAGATATCTCCATTACTTGGATTGTGTATCCAGGCTCCAAGGAACTCACGTCAAAGCTTAGTAAAAAAAGGACGCTCACAAGCTAATGCCGTTGCTCAGCAAGCTTTAATTGCCCACTGGCAAAGTATTGTGGGAAGCTTGAACAATTATCTGAAGATAATGAAAGCAAACTATGTGCCCCCTTTCTTAGTTCGTAAAGTGTTCACTCAAATATTCTCATTCATCAATGTTCAATTATTTAACAGTCTTCTGTTGCGTCGGGAGTGTTGTTCATTCAGCAATGGGGAGTATGTAAAGACAGGTTTGGCTGAATTAGAACAGTGGTGCATTGACGCAACAGATGAGTATGCTGGCAACGCTTGGGAAGAATTGAAGCATATTCGGCAGGCTGTTGGATTCCTAGTGATACATCAAAAACCCAAGAAGACcttaaatgaaataacaaagGAGCTATGCCCTGTTCTTAGTATACAACAGTTATACAGGATTAGTACCATGTATTGGGATGACAAATATGGCACACACAGTGTGTCTACAGAGGTTATATCGAACATGAGAGTTATGATGACCGAGGACTCCAACAATGCTGTCAGCAGTTCTTTCCTTCTAGATGATGACTCAAGCATTCCATTTTCGGTGgatgatatttcaaaatcaatgcaaCAAATAGAAGTAGCTGACGTGGATGCTCCTCCTTTGATACGTGAGAACTCAGGCTTTGGGTTCTTGCTAGCGCGTTCAGAAtg 4595 0.4139 MVAPVNIIVGSHAWVEDSAQAWIGGEVFKISGEEVYVRTADGKTVVTNISKAFPKDNEAPPGGVDDMTKLSYLHEPGVLHNLATRYELNEIYTYTGNILIAINPFQRLPHLYDSHMMEQYKGAAFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDNKGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPAEEKERYKLGSPSSFHYLNQSNCYQLDGVDDSHEYLATRRAMDIVGISEEEQEAIFRVVAAILHLGNIEFAKGEEIDSSVIKDDKSRFHLNTTAELLKCDAKSLEDALIKRVMVTPEEVITRTLDPVAAVGSRDALAKTIYSRLFDWLVEKINISIGQDPNSKSIIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDMLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFTISHYAGEVTYLADMFLDKNKDYVVAEHQDLLTASKCSFAAGLFPALREDSSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPAIFENVNIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLNRFGVLAPEVLEGNYDDKVACQMVLDKMGLKGYQIGKKKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTHIARKEFVELRQAAICLQSNLRGILARELYEQLRREAAALRIEKHFRGHVARKSYLTTRSSAITLQTGLRAMKARNEFRFRKQTKAAILVQAHLRRHIACSYYKRLQKAAIVTQCGWRRRVARRELRKLKMAARETGALKEAKDKLEKRVEELTWRLQIEKRLRTDFEEEKTQEIAKLQDALHAMQMQLEEANANVIKEREAARKAIEEAPPVIKETPVMVQDNEKINSLMAEVNSMKESLLLERQAAEEARKARVEVEARNSELVKKLEDSERRVDQLQESVQRLEDKVSNMESENQVLRQQALTVSPTGKALSVRPKTVIIQRTPENGSALNGEVKMAPDMTLAVSNVREPESEGKPQKSLNEKQQENQELLIRCISQDLGFSGGKPVTACLVYKCLLHWRSFEVERTTVFDRVIQTIASAVEVQDNTDVLAYWLSNTSTLLLLLQRTLKASGAASLTPQRRRTTSASLFGRMSQGLRGSTQSAGLSFLNGRGLGRVDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRNSRQSLVKKGRSQANAVAQQALIAHWQSIVGSLNNYLKIMKANYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKTGLAELEQWCIDATDEYAGNAWEELKHIRQAVGFLVIHQKPKKTLNEITKELCPVLSIQQLYRISTMYWDDKYGTHSVSTEVISNMRVMMTEDSNNAVSSSFLLDDDSSIPFSVDDISKSMQQIEVADVDAPPLIRENSGFGFLLARSE 1531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01080 1531 Gene3D - 439 623 - -
Bva05g01080 1531 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bva05g01080 1531 PANTHER MYOSIN-5 6 1527 - -
Bva05g01080 1531 CDD MYSc_Myo11 76 720 IPR036018 -
Bva05g01080 1531 CDD MyosinXI_CBD 1113 1497 IPR037975 GO:0007015
Bva05g01080 1531 Gene3D - 252 310 - -
Bva05g01080 1531 SMART DIL_2 1349 1456 IPR002710 -
Bva05g01080 1531 Pfam DIL domain 1350 1453 IPR002710 -
Bva05g01080 1531 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva05g01080 1531 ProSiteProfiles IQ motif profile. 783 812 IPR000048 GO:0005515
Bva05g01080 1531 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva05g01080 1531 ProSiteProfiles IQ motif profile. 806 835 IPR000048 GO:0005515
Bva05g01080 1531 Pfam Myosin N-terminal SH3-like domain 10 48 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bva05g01080 1531 ProSiteProfiles IQ motif profile. 854 883 IPR000048 GO:0005515
Bva05g01080 1531 Pfam IQ calmodulin-binding motif 759 778 IPR000048 GO:0005515
Bva05g01080 1531 Pfam IQ calmodulin-binding motif 737 755 IPR000048 GO:0005515
Bva05g01080 1531 Pfam IQ calmodulin-binding motif 807 827 IPR000048 GO:0005515
Bva05g01080 1531 Pfam IQ calmodulin-binding motif 856 875 IPR000048 GO:0005515
Bva05g01080 1531 Coils Coil 916 957 - -
Bva05g01080 1531 Coils Coil 877 911 - -
Bva05g01080 1531 Coils Coil 979 1051 - -
Bva05g01080 1531 PANTHER MYOSIN 6 1527 - -
Bva05g01080 1531 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Bva05g01080 1531 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Bva05g01080 1531 ProSiteProfiles IQ motif profile. 831 857 IPR000048 GO:0005515
Bva05g01080 1531 Gene3D - 735 784 - -
Bva05g01080 1531 Gene3D - 833 882 - -
Bva05g01080 1531 Gene3D - 785 832 - -
Bva05g01080 1531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 883 IPR027417 -
Bva05g01080 1531 ProSiteProfiles IQ motif profile. 737 761 IPR000048 GO:0005515
Bva05g01080 1531 Gene3D - 667 730 - -
Bva05g01080 1531 SMART MYSc_2a 56 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva05g01080 1531 ProSiteProfiles Dilute domain profile. 1162 1474 IPR002710 -
Bva05g01080 1531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 785 IPR027417 -
Bva05g01080 1531 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva05g01080 1531 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva05g01080 1531 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva05g01080 1531 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva05g01080 1531 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva05g01080 1531 Gene3D Kinesin motor domain 65 662 IPR036961 -
Bva05g01080 1531 SMART iq_5 853 875 IPR000048 GO:0005515
Bva05g01080 1531 SMART iq_5 757 779 IPR000048 GO:0005515
Bva05g01080 1531 SMART iq_5 734 756 IPR000048 GO:0005515
Bva05g01080 1531 SMART iq_5 830 852 IPR000048 GO:0005515
Bva05g01080 1531 SMART iq_5 805 827 IPR000048 GO:0005515
Bva05g01080 1531 SMART iq_5 782 804 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01080 Bva-Chr5 5539776 5554710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01080 67 1531 Myosins gene family AT5G20490 83.208 0.0 2534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01080 K10357 - gmx:100777802 2729.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01080 05 5539776 5554710 Bva05g01080 05 5539776 5554710 ECH