Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01069 ATGGGCATGAACAAGGGAAACTTAGGCCCCAGTCTCAAGCTCACTGTTCCCGCATCTGATCAGGTTTCTTTTACCAGATTCCTgaCTGAAAGTGGAACCTTTAAGGATGGGGATCTTCTTGTCAACAGGGATGGAGTTCGAATTGTCTCTAAAAGCGAAGTCGAAGCTCCCCCACCTATCAGGCCACTAGACAACCAGTTAAGTTTGGCGGACATCGACGTAATCAAAGTGgttggaaaaggaaatggtGGGGTTGTGCAATTGGTGCAACACAAATGGACTAATCAGTTCTTTGCACTGAAGGAGATTCAAATGAACATTGATGAGTCTGTGCGTAAACAGATAGCACAAGAACtgaaaatcaatcaatcagtTCAATGCCCTTATGTTGTTATATGCTACCACTCGTTCTATCATAATGGAGTCATATCTATCGTCTTAGAGTATATGGATGGTGGGTCTTTAGCAGATTTTTTGAAGAACGTTAAAACAATACCAGAGGCATATCTTGCTGCCATCTGTAAGCAGGTGCtgaatggtttaatgtatcttCACCGTGATAGACATATTATTCACAGGGACTTAAAACCTTCTAATTTACTGATAAATCATAGAGGGGAAGTAAAAATCACTGACTTTGGTGTGAGTGCGATCCTGGAAAGTACATCTGGTCAAGCAAATACTTTCATTGGCACCAACAACTATATGTCTCCAGAGAGAATCAATGGAAGCCAGAACGGCTACAACTACAAAAGTGATATATGGAGTTTGGGACTGATATTGCTCCAGTGTGCCATGGGAAGATTTCCATATACACCACCAAATCAGGGTGAAGAATGGGAAAGTATTTTTGAACTTATTGAAGCTATTGTTGATAAACCTCCTCCCTCTGCTCCATCTGATCAATTTTCGCCAGAGTTCTGTACATTTATCTCAGCATGCTTACAGAAAGACCCAAGAGATAGGCTGTCAGCTCAAGAACTTCTGAGACATCCTTTTATCAACATGTATGAAGACTTGGATGTGGATCTTTCAGCTTACTTCACCAATGTAGGATCTCCACTTGCAACCTTGTA 1076 0.3959 MGMNKGNLGPSLKLTVPASDQVSFTRFLTESGTFKDGDLLVNRDGVRIVSKSEVEAPPPIRPLDNQLSLADIDVIKVVGKGNGGVVQLVQHKWTNQFFALKEIQMNIDESVRKQIAQELKINQSVQCPYVVICYHSFYHNGVISIVLEYMDGGSLADFLKNVKTIPEAYLAAICKQVLNGLMYLHRDRHIIHRDLKPSNLLINHRGEVKITDFGVSAILESTSGQANTFIGTNNYMSPERINGSQNGYNYKSDIWSLGLILLQCAMGRFPYTPPNQGEEWESIFELIEAIVDKPPPSAPSDQFSPEFCTFISACLQKDPRDRLSAQELLRHPFINMYEDLDVDLSAYFTNVGSPLATL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01069 358 ProSiteProfiles Protein kinase domain profile. 72 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01069 358 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Bva05g01069 358 Gene3D Transferase(Phosphotransferase) domain 1 152 353 - -
Bva05g01069 358 SUPERFAMILY Protein kinase-like (PK-like) 69 340 IPR011009 -
Bva05g01069 358 CDD PKc_MAPKK_plant_like 87 338 - -
Bva05g01069 358 Pfam Protein kinase domain 74 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01069 358 SMART serkin_6 72 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01069 358 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 3 358 - -
Bva05g01069 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Bva05g01069 358 PANTHER MAP KINASE KINASE 3 358 - -
Bva05g01069 358 Gene3D Phosphorylase Kinase; domain 1 51 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01069 Bva-Chr5 5498492 5502975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01069 29 356 MAP Kinase Kinase Gene Family AT4G26070 68.580 3.14e-171 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Bva05g01069 Pkinase 2.9e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01069 K20603 - gmx:100789734 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01069 05 5498492 5502975 Bva06g00569 06 5965906 5969583 BWGD
Bva05g01069 05 5498492 5502975 Bva05g01069 05 5498492 5502975 ECH