Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01068 ATGGAGGAAATATCTCCGACGGTTGCAGTTCCATTCACACTTGgtaatttgattcaaaagGAATCTGCAGTGGCAACCCACATAGAGATAACCGGTCTACAGCTTATGGCAAATACAGCCGCTTTGATATTAAGCCCTGCTATGGAGGATTGTGCATCATACTCTGGGGGAAGTGAAAATCTCGCAGATGTTAGTCCACTGCATCAAATTGCGGTTTCTGCAAGGGAAAAGGACAAGTGGGTGGGAGCAGCCCCTGCTTCAGAAATGATTGTTAAAACTGATAGGAATCAGATCTTGAGTGGAACCAATTATCAAAAAGGGAAGGAAGATGAATACATGATAGCAGTTGATGATTCGTGCTCACTATCTTTGGCCAATAACACTAGCAATCTATGTGGCAGGAAGTCTCCTGAGATTGATTCACCTATTACCATGGGGATCGATGATAAAATCACACTCCTAGAGCCAGTACAGAACATGGCTTCTGTTGCAATGGATTTAGAGAGTGAGGATAGCATTGGATCAGATGGGTTTCATCCAAAGGCACCTTCTATACTTCTTGATGTGCTAGAGAAGAAAGTATGTAGACCAAGCTGCCAGGATGCTTCGCAATTGAGTGCTGGCCCTCTCTGGGGTTTCTCATCTATTTGTGGAAGGAGAGAGGAGATGGAAGATGCTCTTTCTGCTGTGCCCCAACTTCTTCAGGTCCCTTCACATATGCTTATGGATGACCATGTGAATGAAAACAGAAAGTCCAATTTAGCCCACTTTTTTGGTGTTTATGATGGACATGGAGGCTGTCAGGTTGCTAATTATTGCCGAGAGCGTCTCCATTCAGCGTTGATTGAGGAAATAGAAACTGCAAAATCAAGCATGGCTGCAAAAAATGAGGAAGAGAACTTGCAGGAGCATTGGAAGAAGGCATTCTCTAATTGTTTTAAGAAAGTTGATGCTGAGGTTGGAGGAGTTAGTGCCGGTGATGATGAAACCATTAGTGATACGTCTGAGCCTAGCCGTGAACCTCTTGCCCCTGAAACTGTTGGTTCCACTGCCGTGGTTGCCCTTTTAAGTCAAACCCACATAACAGTTGCAAACAGCGGGGATTCAAGAGCGGTCCTGTACCGTGGAAAAGAAGCCATCCCACTGTCTGCTGACCACAAACCACATAGAGAGGATGAGTGGGCAAGGATAGAAGCTTCTGGAGGAAAGATCATACAGTGGAATGGGTACCGGGTTCTTGGTGTTTTGGCAGTGTCAAGGTCCATAGGTGACAGATACTTGAAACCATGGGTAATTCCAGATCCTGAGGTCAAGTTTATTCGTCGAGAGAAAAATGACGAGTGCCTTGTTCTAGCTAGCGATGGTCTATGGGATGTCATGACAAATGAAGAAGCCTGCGAGATTGCACGAAAGCGAATCCTTCTTTGGCACAAGAAGTATGGCAATGATGTTAATGTAGCAGCTCAACGACACGACGGAGTTGATCCTGCAGCACAATCTGCCGCTGAGTATCTATCTAACTTTGCCCTCCAAAGAGGAAGCAAAGATAACATCTCTGTTATTGTCGTAGACCTGAAGgctcaaagaaaatttaagagaaaaacatG 1607 0.4406 MEEISPTVAVPFTLGNLIQKESAVATHIEITGLQLMANTAALILSPAMEDCASYSGGSENLADVSPLHQIAVSAREKDKWVGAAPASEMIVKTDRNQILSGTNYQKGKEDEYMIAVDDSCSLSLANNTSNLCGRKSPEIDSPITMGIDDKITLLEPVQNMASVAMDLESEDSIGSDGFHPKAPSILLDVLEKKVCRPSCQDASQLSAGPLWGFSSICGRREEMEDALSAVPQLLQVPSHMLMDDHVNENRKSNLAHFFGVYDGHGGCQVANYCRERLHSALIEEIETAKSSMAAKNEEENLQEHWKKAFSNCFKKVDAEVGGVSAGDDETISDTSEPSREPLAPETVGSTAVVALLSQTHITVANSGDSRAVLYRGKEAIPLSADHKPHREDEWARIEASGGKIIQWNGYRVLGVLAVSRSIGDRYLKPWVIPDPEVKFIRREKNDECLVLASDGLWDVMTNEEACEIARKRILLWHKKYGNDVNVAAQRHDGVDPAAQSAAEYLSNFALQRGSKDNISVIVVDLKAQRKFKRKT 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01068 535 PANTHER ALPHABET, ISOFORM E-RELATED 129 535 - -
Bva05g01068 535 SUPERFAMILY PP2C-like 210 526 IPR036457 -
Bva05g01068 535 MobiDBLite consensus disorder prediction 324 344 - -
Bva05g01068 535 CDD PP2Cc 212 525 IPR001932 -
Bva05g01068 535 SMART PP2C_4 200 523 IPR001932 -
Bva05g01068 535 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 129 535 - -
Bva05g01068 535 Pfam Protein phosphatase 2C 212 518 IPR001932 -
Bva05g01068 535 SMART PP2C_SIG_2 241 525 IPR001932 -
Bva05g01068 535 ProSiteProfiles PPM-type phosphatase domain profile. 210 525 IPR001932 -
Bva05g01068 535 ProSitePatterns PPM-type phosphatase domain signature. 257 265 IPR000222 GO:0043169
Bva05g01068 535 Gene3D - 199 535 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01068 Bva-Chr5 5494812 5498932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01068 1 535 PP2C-type Phosphatase Gene Family AT1G17550 44.384 2.21e-136 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01068 K14497 - gmx:100802159 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01068 05 5494812 5498932 Bva06g00570 06 5968082 5974143 BWGD
Bva05g01068 05 5494812 5498932 Bva05g01068 05 5494812 5498932 ECH