Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01055 ATGGAACCTCGTGTTGGTAACAAGTTTCGGCTGGGCCGGAAGATCGGTAGCGGCTCCTTCGGGGAGATCTATTTAGGTACTAATGTTCAAACTAACGAAGAGGTTGCAATCAAGCTTGAAAATGTCAAGACAAAGCATCCTCAGTTGCTGTATGAATCCAAGTTATACAGAATTCTCCAGGGAGGAACTGGAATTCCTAATGTTAAATGGTTCGGAGTGGAGGGGGATTATAATGTTCTTGTGATGGACCTGCTTGGACCTAGTCTTGAAGATCTATTTAACTTCTGCAGTAGAAAGCTCTCACTGAAGACTGTTCTCATGCTTGCAGATCAAATGATAAACCGAGTTGAATTCATTCATTCTAAGTCATTTCTACATCGAGATATTAAGCCAGATAATTTTCTCATGGGCTTGGGAAGGCGTGCAAACCAGGTTTACTGTATTGATTTTGGTTTGGCTAAGAAATATAGAGATAGTTCAACCCATCAACATATTCCTTACAGggaaaataagaatttgacAGGGACTGCTAGATATGCAAGCATGAACACTCACCTTGGAATAGAGCAAAGCCGAAGAGATGATTTAGAGTCTCTTGGATATGTCCTGATGTACTTCCTAAGAGGAAGtCTTCCTTGGCAAGGACTTAAGGCAGGAACCAAGAAAcagaagtatgagaaaatCAGTGAAAAAAAGGTTTCTACCTCAATTGAGGCTCTGTGTCGAGGTTATCCAACCGAATTTGCTTCATATTTCCATTACTGTCGTTCATTGCGGTTTGATGATAAGCCAGATTATGCTTATCTCAAAAGAATATTTCGTGATCTCTTTATTCGTGAAGGGTTTCAATTTGATTATGTGTTTGATTGGACCATCTTGAAGTATCAGCAGTCACAGTTGGCCACTCCTCCAGCACGTGCCCTtGGTCCCAATGCTGGAACTAGTTCTGCAATGCCTCCTGCTGTGGCCAATGCAGATAGACAGACAGGAGGGGAAGATGGGCGACCTCCTGGACTTGTTTCAGTGGATTCCTCGAGGCGAAGAATGTCAGGGCCAATTTTAAATTCTTTAACAAGCCCCATTGTCTTGGGCCAGTCAAGTGGATCCAGGCGAGTTGCTGTCTCTGGTAGCCGTGATGCGTTTGCTGGTGGTGAGTCGGATATTCGCACTCGTGCTACTGAGGCTAGTCCTGGAGCAGCACACAGAATTTCGAGTGGACAAAGAGGTTCACCAATTGTATCTTCAGATCCCAAGAGAATGGCATCTGGGAGAAATGCCGTCAAGAATTATGAAACTGCACTCAAGGGCATTGAGAGTTTGCAGTTAGAGAATGATGAGAGGGCccattatta 1352 0.4268 MEPRVGNKFRLGRKIGSGSFGEIYLGTNVQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVKWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFIHSKSFLHRDIKPDNFLMGLGRRANQVYCIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPARALGPNAGTSSAMPPAVANADRQTGGEDGRPPGLVSVDSSRRRMSGPILNSLTSPIVLGQSSGSRRVAVSGSRDAFAGGESDIRTRATEASPGAAHRISSGQRGSPIVSSDPKRMASGRNAVKNYETALKGIESLQLENDERAHY 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01055 450 Gene3D Transferase(Phosphotransferase) domain 1 1 314 - -
Bva05g01055 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Bva05g01055 450 PANTHER CASEIN KINASE-RELATED 1 310 - -
Bva05g01055 450 PANTHER CASEIN KINASE I-LIKE 1 310 - -
Bva05g01055 450 PANTHER CASEIN KINASE I-LIKE 357 432 - -
Bva05g01055 450 MobiDBLite consensus disorder prediction 303 352 - -
Bva05g01055 450 MobiDBLite consensus disorder prediction 374 425 - -
Bva05g01055 450 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01055 450 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Bva05g01055 450 PANTHER CASEIN KINASE-RELATED 357 432 - -
Bva05g01055 450 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01055 450 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Bva05g01055 450 CDD STKc_CK1_delta_epsilon 8 282 - -
Bva05g01055 450 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01055 Bva-Chr5 5430040 5435298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01055 7 223 EF-hand Containing Proteins AT2G17890 25.778 8.18e-13 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Bva05g01055 Pkinase 6.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01055 K02218 - gmx:100785851 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01055 05 5430040 5435298 Bva06g00583 06 6050613 6054991 BWGD
Bva05g01055 05 5430040 5435298 Bva05g01055 05 5430040 5435298 ECH