Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01052 ATGCTCGGAGTTGGGGACCTACTCTCAGGTACAAGCAGAGAAAAAATGGCGGCTGCGCATGGTGACGGAGGTGGTGGGTTTTGTTCGGTGTTCTCGTCCACTCTCTTCACGGAACCCATCGATGAGGTGATACTTAATAAAGCTACGGAAGCACAGAATGTGAAAGACATGGTTGAAGTAGTGACAGTCAAATCAAAGCAAGTAACCGTCTTCGACGATGAAGCTAGCGCTAATTCCGGCTCCTCTTTTGATGCTGAAGATGAGGACCACGATGATGTTTTCCGGTCATCGTCTTCGTCCACGAAATTCAGTCAAGGTTCAGAAAGGAAATCCACCTCCGAAGTGACTGAAGCGATTCGGCTGGTTAATATCAAAGAAGAGGTAGAGGTAGACGACTGTGACAGATATGGAGGTGAATCCGGCGATGGTTGCTATAACATGGTTAATGGgtcttcctcttcctcatcGATTGAGTTGGCGAAACCGATGGAGGGGTTGCACGAGCTGGGTCCACCGCCGTTCCTGAAGAAGACCTTTGAAATGGTGGAGGACCCGGAAACCGACCTGATCGTGTCCTGGAACGAATCTCGTGATAGCTTCATCGTTTGGGATTCTTACGAATTCTCCAAAATCCTTCTCCCAAAATACTTCAAGCACAGCAATTTCTCCAGCTTCATTCGCCAGCTCAACACTTACGGGTTTAGGAAGGTTGATTCGGATCGTTGGGAGTTTGCAAATGAGGGATTTCGTGGAGGGAAGAAGCATTTGCTGAAGAACATCAGGAGAAAAAGCAAGTACAACAAACAGCAACAAGGAACATTCAATTTGACAAAGCCCGGCCAGGAAACCGAATTTGAGAAACTGAAAAAGGATCAAAACATAATGAAACTGGAAATTCTGAAACTGAGACAGCAACAAGAGAATTCACAGATTCACCTCAAAGATGTGCAAGACCAAATGCGGTGCGCCGAGATGAAGCAACATCAGATGCTGTTTTTCCTGACGAGAATGGCAAGAAATCCATCGTCAATTCAACAGTTAGTCCAGAGGATAAAGCGAAAAAGAGAGCTCGACGGGGGTGAGATAAGCAGATTGCTCGGAACACAATCCCCTGCTATCTTCAATGTTCATACATTGCAATCCGAGCTCAATGGGTTCTTGTCTGAAGATGTGAACACTACCTTAGTGAATCCCCCATCCCCTCCTCCACGGAGAGATGAACTATGCAGGCCAACCATACAAGGCTTGATTGCTAATGCTTCCAGAGCAAGCAATGTATCTTCTGCCTATCATGTTGTGTCAGAAAAACTGATGAGGGAAAACACTCTAGTTGATGAAGGACTAGACGTGAATGACACAAACATCTATCTTGAATTGGAGGACTTGATAACTAAACCATCGGATTGGGGTGGATCCGCAACTGGATTGGTGGGGCAAACTGGTTGCATATG 1451 0.4555 MLGVGDLLSGTSREKMAAAHGDGGGGFCSVFSSTLFTEPIDEVILNKATEAQNVKDMVEVVTVKSKQVTVFDDEASANSGSSFDAEDEDHDDVFRSSSSSTKFSQGSERKSTSEVTEAIRLVNIKEEVEVDDCDRYGGESGDGCYNMVNGSSSSSSIELAKPMEGLHELGPPPFLKKTFEMVEDPETDLIVSWNESRDSFIVWDSYEFSKILLPKYFKHSNFSSFIRQLNTYGFRKVDSDRWEFANEGFRGGKKHLLKNIRRKSKYNKQQQGTFNLTKPGQETEFEKLKKDQNIMKLEILKLRQQQENSQIHLKDVQDQMRCAEMKQHQMLFFLTRMARNPSSIQQLVQRIKRKRELDGGEISRLLGTQSPAIFNVHTLQSELNGFLSEDVNTTLVNPPSPPPRRDELCRPTIQGLIANASRASNVSSAYHVVSEKLMRENTLVDEGLDVNDTNIYLELEDLITKPSDWGGSATGLVGQTGCI 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01052 483 MobiDBLite consensus disorder prediction 75 115 - -
Bva05g01052 483 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 154 469 IPR027725 -
Bva05g01052 483 SUPERFAMILY "Winged helix" DNA-binding domain 170 263 IPR036390 -
Bva05g01052 483 PRINTS Heat shock factor (HSF) domain signature 174 197 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva05g01052 483 PRINTS Heat shock factor (HSF) domain signature 212 224 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva05g01052 483 PRINTS Heat shock factor (HSF) domain signature 225 237 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva05g01052 483 SMART hsfneu3 170 263 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva05g01052 483 MobiDBLite consensus disorder prediction 97 115 - -
Bva05g01052 483 Gene3D - 167 264 IPR036388 -
Bva05g01052 483 ProSitePatterns HSF-type DNA-binding domain signature. 213 237 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva05g01052 483 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-9 154 469 - -
Bva05g01052 483 Pfam HSF-type DNA-binding 174 263 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01052 Bva-Chr5 5412802 5415256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01052 161 469 HSF AT2G26150 41.358 3.78e-74 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bva05g01052 HSF_DNA-bind 3.5e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01052 K09419 - gmx:100818430 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01052 05 5412802 5415256 Bva05g01052 05 5412802 5415256 ECH