Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01022 ATGGCCAACATGGTTGAACCAGATAGCTTGCTTCCCTCCTCTCCAGTAATGCCTCGCCGAGTGCTCCAAGTGGGAGCTCCTCCAGCCCCTAAAGAAAACCAGAACTCCAAGTCTCACAGAGAAGAATTATTCTTTCTCCTTGGTGGACTAGTGCTGCTCATCACATTGCTAATTCTTCTATTTCTGTATCGGAAACGTATTCAATCAGAAACACTGAGGAAAAAAATAGCTTCAAGTAATCAGCTTCTAGCTAAGGTCATGATGACAGCTCCCACCAAACAGCATCAAGCATCAATGGAGTTCATCAGTGAGAGCCTTAGATCAATTAGCTATTTTGATCTCCAGACATTAAAGAGGGCAACCAAGAATTTCCATCCTGCTAATCTTCTTGGAAGTGGAGGATTTGGACCCGTCTACCggGGTAAGTTGGCAGATGGAAGGCTAATTGCCGTTAAGAAATTGTCTCTTAACAAATCCCAGCAAGGAGAAAAGGAATTTCTGCAAGAGGTGAAATTGATCACAAGTATCCAACACAAAAATCTGGTTCGTCTCCTTGGAAGTTGCATAGATGGGCCTCAAAGGATTCTTGTGTATGAATacatgaaaaacaaaagtttggACCTCATAATATACGGAAAATGTGACCAATTTCTGAACTGGAATGCTAGGTTCCAAATTATTCTTGGAATAGCACGGGGATTGCAATATCTCCATGAGGATTCATATGTAAGAATTGTTCACCGAGATATCAAAGCGAGCAATATTCTTCTTGATGAGAAGTTTTTGCCCAAGATTGGAGATTTTGGGCTTGCCAGATTCTTTCCAGAAGACGAAGCTTACTTAAGCACTACATTTGCTGGAACATTaGGTTATACAGCACCTGAATATGCTATTAGAGGAGAACTGACAGAAAGGGCAGACATCTATAGTTTTGGAGTTCTTATGCTCGAAATCATCAGTTGCAGGAAAAACACAGATCTTACATTACCATCAGAGAAGCAGTACCTCCCTGAATATGCTTGGAGACTTTACAAGAGGTCAACCTTGATGGATCTTGTAGAtccaaaaatgaaacaagatgGATTTGTGGAAAAGGATGTTCTGCAAGCAATCCATGTTGCCTTACTATGTCTTCATCCTCTTGCAAATTTGAGACCTCCCATGTCAGAGGTTGTAGCATTGTTGacattcaaaattgaaatggtTGCAACACCCATGAGACCAGCCTTCCTCGATCGAAGGCGCAGGAGGCATGAAGAGACCCATTCTTGGGATGATATTTCTGACACTTTCCCTTCTCAAGTGGTCAGTGGTTCAACTTCACTGCCTTCTAGACTAGAAAATTA 1346 0.4027 MANMVEPDSLLPSSPVMPRRVLQVGAPPAPKENQNSKSHREELFFLLGGLVLLITLLILLFLYRKRIQSETLRKKIASSNQLLAKVMMTAPTKQHQASMEFISESLRSISYFDLQTLKRATKNFHPANLLGSGGFGPVYRGKLADGRLIAVKKLSLNKSQQGEKEFLQEVKLITSIQHKNLVRLLGSCIDGPQRILVYEYMKNKSLDLIIYGKCDQFLNWNARFQIILGIARGLQYLHEDSYVRIVHRDIKASNILLDEKFLPKIGDFGLARFFPEDEAYLSTTFAGTLGYTAPEYAIRGELTERADIYSFGVLMLEIISCRKNTDLTLPSEKQYLPEYAWRLYKRSTLMDLVDPKMKQDGFVEKDVLQAIHVALLCLHPLANLRPPMSEVVALLTFKIEMVATPMRPAFLDRRRRRHEETHSWDDISDTFPSQVVSGSTSLPSRLEN 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01022 448 SUPERFAMILY Protein kinase-like (PK-like) 99 398 IPR011009 -
Bva05g01022 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Bva05g01022 448 Gene3D Phosphorylase Kinase; domain 1 83 200 - -
Bva05g01022 448 MobiDBLite consensus disorder prediction 427 448 - -
Bva05g01022 448 MobiDBLite consensus disorder prediction 422 448 - -
Bva05g01022 448 PANTHER RECEPTOR-LIKE KINASE 100 416 - -
Bva05g01022 448 CDD STKc_IRAK 130 396 - -
Bva05g01022 448 Pfam Protein tyrosine and serine/threonine kinase 128 340 IPR001245 GO:0004672|GO:0006468
Bva05g01022 448 SMART serkin_6 124 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01022 448 ProSiteProfiles Protein kinase domain profile. 124 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01022 448 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 100 416 - -
Bva05g01022 448 Gene3D Transferase(Phosphotransferase) domain 1 201 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01022 Bva-Chr5 5246095 5249591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01022 112 411 Receptor kinase-like Gene Family AT1G56120 48.000 6.42e-97 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva05g01022 PK_Tyr_Ser-Thr 9.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01022 - - ccaj:109792436 580.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01022 05 5246095 5249591 Bva06g00620 06 6244850 6247774 BWGD