Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01015 ATGGGAAACTGTTTGGGCCATCGACCAGAATCCTCAGGCCCTCGAGTAGACACTGCTGAAAGCAATCAATTAGGGAGAGCTGATAGACAAAGTAATTCGAGACTATTGCAGAGTGAGGGCAATTCCACATCTTTTGGGCACAGCAGACTCTTTGGGCCAAGTAGCAGTAATACATATACAAGCAACACTAGTACCTCTATTTTAGGTTCTGAGAACAGTCGAACCTCTGGAGTGAGAGGTCAAGAGGAATTTCCAGATGGGCAGATCTTGGATGCTGCAAACTTGAGAGTTTTCAATTTGGCAGAACTGAAGACAGCAACTAGAAATTTCAGAGCTGATACAGTAATCGGAGAAGGGGGATTTGGCAGAGTATACAAGGGTTGGCTTAGAGAGAGAACAGAATCAAATAAAGTTGGGGAATTGGTTATCGCCATCAAGAGGATGAACTCTGAAAGTAAACAAGGAATTGAAGAATGGCTGTCAGAGGTGAATTTCTTAGGAAGGCTTTCTCACCCTAACCTTGTAAAGTTGTTTGGATTTGCAAGGGAAGATGGGGAGCTAATTCTGGTCTATGAATTCATGCACAGGGGCAGCTTGGCTAATCACCTGTTTGGAAGGGGGGCCAATATACGTCCACTTTCTTGGGGCACAAGGCTCAAGGTTATGATTGGAGCAGCCAGGGGGTTATGTTTCTTGCACTCGTTGGAAAAGAAGATCATATACAGAGATTTTAAGCcatcaaatatattacttGACAGCTCCTACAATACCAAGTTAGCAGACTTTGGTTTGGCCAAACACGGTCCTTCAGATGATAGAACTCATGTCACAACAAAGGTTGTAGGAACTCATGGTTATACTGCACCAGAGTACATTGCCACAGGTCATCTGTCTGTGAAAAGTGATGTTTATAGCTTTGGGGTTGTTCTGGTGGAGATGCTAACAGGCAAAAGCATACGTGATATAAGGCAACAATCTGAACAACAATCACTAGTTGATTGGCTGAAATCCAATCTACTGAGAAGTGGAAAAATGATAGGTGCAATGGATCCAAGGTTGGGGGGGAAATATCCACCCAAGTTAGCTTCACAAGTAGCTCAACTAGCCCTCAAATGCATCAGATTGGAGAACAAGCTCAGGCCATCCATGACAGAAGTGGTTGAAACACTGGAACAGATTGAAGCAGCcaatattgaaaaatcaagCACTACTGATGACAGAAAACATGCCAGTGCCACTCATTCTAGGGCAGCTCAACTTCATGGCCGACCAGATGGAGGTTA 1283 0.4326 MGNCLGHRPESSGPRVDTAESNQLGRADRQSNSRLLQSEGNSTSFGHSRLFGPSSSNTYTSNTSTSILGSENSRTSGVRGQEEFPDGQILDAANLRVFNLAELKTATRNFRADTVIGEGGFGRVYKGWLRERTESNKVGELVIAIKRMNSESKQGIEEWLSEVNFLGRLSHPNLVKLFGFAREDGELILVYEFMHRGSLANHLFGRGANIRPLSWGTRLKVMIGAARGLCFLHSLEKKIIYRDFKPSNILLDSSYNTKLADFGLAKHGPSDDRTHVTTKVVGTHGYTAPEYIATGHLSVKSDVYSFGVVLVEMLTGKSIRDIRQQSEQQSLVDWLKSNLLRSGKMIGAMDPRLGGKYPPKLASQVAQLALKCIRLENKLRPSMTEVVETLEQIEAANIEKSSTTDDRKHASATHSRAAQLHGRPDGG 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01015 427 MobiDBLite consensus disorder prediction 1 82 - -
Bva05g01015 427 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-RLCK-VIIA-2 FAMILY-RELATED 29 427 - -
Bva05g01015 427 MobiDBLite consensus disorder prediction 398 427 - -
Bva05g01015 427 ProSitePatterns Protein kinases ATP-binding region signature. 116 146 IPR017441 GO:0005524
Bva05g01015 427 Pfam Protein kinase domain 112 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01015 427 MobiDBLite consensus disorder prediction 15 79 - -
Bva05g01015 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Bva05g01015 427 Gene3D Transferase(Phosphotransferase) domain 1 194 419 - -
Bva05g01015 427 ProSiteProfiles Protein kinase domain profile. 110 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01015 427 CDD STKc_IRAK 116 393 - -
Bva05g01015 427 SUPERFAMILY Protein kinase-like (PK-like) 95 396 IPR011009 -
Bva05g01015 427 PANTHER OS01G0588500 PROTEIN-RELATED 29 427 - -
Bva05g01015 427 Gene3D Phosphorylase Kinase; domain 1 94 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01015 Bva-Chr5 5212882 5215705 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01015 71 390 Glycoside Hydrolase AT3G07070 42.368 2.25e-87 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva05g01015 Pkinase 2.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01015 - - gmx:100813304 513.072