Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00996 ATGTCTTCGTGTTTAACCGGAGCTGGTGGGAGAACCTATGGGTTTGATTTCGATTTTGTCAAATCTCCATCTATATCGACTCTAACTTCACAcacttcttctccttcttcaacTATCTCTGAATCTAGTAATTCCCCAATTGCAATCTCTGCCCGAAAACATCGAACCCCTCGAAAACGTCCGAACCAAACTTACAACGAAGCTGCTGTTCTTCTTTCCACAGCATACCCAAATCTCTTCTCCACCAAAGACCTTAAAAAGCCGGGAAAATTCACTAAACCCAGTGATACCTTTTTGGATGAATCTTCGGAATTGTTATTGCCTTTCCGTGTATTTGACAATTCATCTTTCCTTCTTCACCAGCCAATCCAACACAAACCCAGTTTTCTAATTGAGCCCAAAGTAGTTAATCTGCAAGAAAAACCATGCCAGAGTCCCGGGGAAATCAGCTCGCGAGTGAATTCGTTGGAATTGGACGATGATTATGAAGAGGACTTGGATGCGGAATCGATTCTCGATGAGGAAATTGAAGAGGGAATTGATAGCATCATGGGCAGCAGAGCCGATGACTCCAATGGCGCTTCCTGTCAGAGCGCCCAAATGAATCCATGGAGTGGGATGGATTTCCGACTGGGATTGAGAAATGCAGGAGTGAGAGCTCTCCGGCATGCCGATGAAGGGAATTGGTGGAATTTCCCTACGGTTGATATACTTCAAATCTCACCAAAAATCAGCAAGTCCCCGACTTTGGTTTCAGCggataagaaaaagaagaagaagaagaaggtggAGAAGCCGCCGGTGGAATCGAAGAGTTCAGAATTGCCGAAAGAGAATTCAATTCCCAAATTGAATCCTGGGCTGCAGTTGAAATTGAATTACGACGACATTTTGAATTCGTGGTCTAATAAAGGGTCACCATTTGCCGAAGACAGTCCAGGCTCCGATGCACCGGGAAATGATGTCGCAGCGCGGCTGGCCCAGATTGATCTGTTTACGGACAAGGACAACGTAGGGGTGAGGGAAGCTAGTGTGTTGCGGTACAAGGAAAAACGCCGTACTCGGCTCTTCTCGAAGAAGATCAGGTATCAGGTCAGAAAAGTCAACGCAGATCGACGGCCCAGGATGAAGGGTCGATTTGTTAGGAGGGGAAATTCTAGCTCTAGCTCAAAATGCAGTGGACGCAGATCATG 1193 0.4434 MSSCLTGAGGRTYGFDFDFVKSPSISTLTSHTSSPSSTISESSNSPIAISARKHRTPRKRPNQTYNEAAVLLSTAYPNLFSTKDLKKPGKFTKPSDTFLDESSELLLPFRVFDNSSFLLHQPIQHKPSFLIEPKVVNLQEKPCQSPGEISSRVNSLELDDDYEEDLDAESILDEEIEEGIDSIMGSRADDSNGASCQSAQMNPWSGMDFRLGLRNAGVRALRHADEGNWWNFPTVDILQISPKISKSPTLVSADKKKKKKKKVEKPPVESKSSELPKENSIPKLNPGLQLKLNYDDILNSWSNKGSPFAEDSPGSDAPGNDVAARLAQIDLFTDKDNVGVREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRRGNSSSSSKCSGRRS 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00996 397 MobiDBLite consensus disorder prediction 382 397 - -
Bva05g00996 397 MobiDBLite consensus disorder prediction 29 63 - -
Bva05g00996 397 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 387 - -
Bva05g00996 397 Pfam CCT motif 341 383 IPR010402 GO:0005515
Bva05g00996 397 MobiDBLite consensus disorder prediction 249 287 - -
Bva05g00996 397 MobiDBLite consensus disorder prediction 371 397 - -
Bva05g00996 397 PANTHER OS02G0148000 PROTEIN 1 387 - -
Bva05g00996 397 MobiDBLite consensus disorder prediction 29 50 - -
Bva05g00996 397 ProSiteProfiles CCT domain profile. 341 383 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00996 Bva-Chr5 5077429 5081169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00996 263 383 C2C2-CO-like Transcription Factor Family AT1G68520 37.410 2.96e-20 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva05g00996 CCT 3e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00996 - - aprc:113845796 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00996 05 5077429 5081169 Bva06g00655 06 6436640 6439750 BWGD
Bva05g00996 05 5077429 5081169 Bva05g00996 05 5077429 5081169 ECH