Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00977 ATGGCCGTGAAGGAGAAGAAGTTGCAGAAAAGCTACTTTGATGTGGTGGGTTTGTGCTGCTCCTCCGAGGTTCCTCTCATTGAAAACATAATGAAACCTCTCGACGGAATCAAAGAGGTTTCGGTCATAGTTCCGTCAAGAACTGTCATTGTAATCCATGACAGTGAGCTCATTTCACAAACTCAAATCGTTAAAGCTCTGAATCAAGCAAGGTTGGAAGCAAACATCAGAGTGCATGGAGAtgaaaagcagaaaaagaaatggccaaGCCCGTACGCAATGGCTTCGGGTCTTTTCCTTTTAGCTTCTTTATTAAAGTACGTGTACCTTCCACTCCAATATCTGGCACTGGGAGCAGTTGCAGCTGGCTTCTTTCCAATGATGTTGAAAGCCATTACCTCTGCTTGGAACCGCAGGATTGATATCAACATTCTCATGATCATTGCAGTTGTCGGGACAATTGCCATGGGAGATTATTTGGAAGCTGGCACAgttgtttttctcttctcaattgCAGAATGGCTAGAGTCAAGGGCAAGCCACAAGGCAAGTGCAGTCATGTCTTCGTTGATGAACTTAACTCCTCAGAAAGCTGTGATAGCAGAAACAGGGGAAGTTGTGGACGCTGATGAGGTGAAAATGAATACCATCCTCGCTGTTAAAGCAGGCGAGGCGATACCCATTGATGGAATCGTTGTTGAAGGAGACTGCGAAGTCGATGAGAAGACATTGACTGGTGAATCATTCCCAGTACCCAAACACAAGGACTCCACTGTGTGGGCTGGCACCATCAATTTGAATGGTTATATAAGCGTGAAAACTACAGCACTAGCTGAGGACTCTATGGTGGCTAAAATGGCAAAGCTAGTGGAAGAAGCTCAAAACAGCACAACCAGTACGCAGAGATTGATTGACAAGTTTGCCAAGTTTTACACCCCAGCTGTTGTAGTTATATCAACCCTTGTAGCTGTGATTCCAGCTTTTCTAAGGGTACATAATCTGAGACATTGGTTCCACTTTGCACTGGTTGTTTTAGTGAGTGGCTGTCCATGTGCACTTATCCTTTCTACGCCTGTTGCAACTTTCTGTGCTTATACGAAAGCAGCAACTTCTGGCCTTCTCATCAAAGGGGGTGAATATCTTGAAACCCTTGGGAAAATCAAGATCATGGCTTTTGACAAAACCGGTACTATAACAAAGGGTGAATTTGTGGTGACAGATTTCCAATCTCTTTGTGACGATGTTGATTTGAACACATTGGTCTATTGGGTCTCGAGCATTGAGAGCAAATCTAGTCATCCAATGGCAGCGGCTATTCTTGACTATGGAAGGTCATTCTCTATTGAACCAAAGCCAGAAAAGGTGACCGTATTTGAAAGTTTTCCTGGAGAAGGCATCCGTGGTATAATTGACGGGAGAGATGTTTATattggaaataaaagaatttccGTGAGAGCTGGGTCTGAAACAGTTCCAACCTTACGAGGCAATAGTCAGGAGGGAAAGACTGCTGGCTACATATACTCTGGAGCAACCCTCATTGGGTTCTTTTCTCTTGCGGATGCTTGCCGGTCGGGGGTTCAGGAGGCGGTAGGGCAGTTGAAATTAATGGGAATAAAAACTGCTATGCTCACAGGAGATAGTCAAGCAGCTGCCATGCAAGCGCAAGAGCAGTTAGGTTATGCTCTGGAGCTAGTCCATGCAGAACTTTTACCAGAAGACAAAGTAAAAATCATCACGGAATTTAAAAAGGAAGGGCCCACAGCCATGGTTGGAGATGGTTTAAATGACGCACCTGCTTTAGCTACAGCTGATATTGGTATCTCGATGGGCATTTCTGGTTCTGCACTAGCAAGCGAGACGGGCAATATAATTCTTATGTCAAACGACATTAGAAAGATACCGCAAGCCATCAAACTTGCAAGAAAATCTCATAAGAAAGTAATAGAGAATGTTATTTTATCAGTCTCTACCAAGGCTGTGATTCTTGGCTTGGCTTTTGCTGGCTATCCACTTGTTTGGGCAGCAGTTCTTGCTGACGTTGGAACATGCTTGTTGGTCATCTTAAACAGCATGCTGCTTTTGCACGGAAGAAACAAACGTGGTGGGAAATGTTGTAGATCTTCCACTCAACAGCACTTCCATAAAAATGGATGTGATGCCACTAATAGCAAGCCCTCTCATCAACATCAGCATTGTTGCTCagacaagttgaagaagatATCTCAGCCTAAGAGGTGTTCATCCCACGAGTGTGCCTCAAAGTGTCAGTCTAGCCCTACAAGTGCAAGCTTAGGTGGAAACACAAAGCATACTAATACTACTGAGGCTCATGGTAAATGTAAGGGCAGTGATGAATTCCATCAGCATCAACATCATAATCATCAGCATTGTTGCTCAAATGAGATAAAGAAGGTATCTCAGCCTGAGGAATGTGCATCCTCCAAGTGTGCCTCAAAGTGCTGGTCTAGCCCTACAAATGCAAGCATAGGTGAAAACACCAACCACACTAATGCTGCTCATGATAAATGCAAGGGCAGTGATGAATTCCATGAACCAAAGCATTGTCATGATGGGAGATGTTTCAAGGATACATGTCAGTTTTG 2606 0.429 MAVKEKKLQKSYFDVVGLCCSSEVPLIENIMKPLDGIKEVSVIVPSRTVIVIHDSELISQTQIVKALNQARLEANIRVHGDEKQKKKWPSPYAMASGLFLLASLLKYVYLPLQYLALGAVAAGFFPMMLKAITSAWNRRIDINILMIIAVVGTIAMGDYLEAGTVVFLFSIAEWLESRASHKASAVMSSLMNLTPQKAVIAETGEVVDADEVKMNTILAVKAGEAIPIDGIVVEGDCEVDEKTLTGESFPVPKHKDSTVWAGTINLNGYISVKTTALAEDSMVAKMAKLVEEAQNSTTSTQRLIDKFAKFYTPAVVVISTLVAVIPAFLRVHNLRHWFHFALVVLVSGCPCALILSTPVATFCAYTKAATSGLLIKGGEYLETLGKIKIMAFDKTGTITKGEFVVTDFQSLCDDVDLNTLVYWVSSIESKSSHPMAAAILDYGRSFSIEPKPEKVTVFESFPGEGIRGIIDGRDVYIGNKRISVRAGSETVPTLRGNSQEGKTAGYIYSGATLIGFFSLADACRSGVQEAVGQLKLMGIKTAMLTGDSQAAAMQAQEQLGYALELVHAELLPEDKVKIITEFKKEGPTAMVGDGLNDAPALATADIGISMGISGSALASETGNIILMSNDIRKIPQAIKLARKSHKKVIENVILSVSTKAVILGLAFAGYPLVWAAVLADVGTCLLVILNSMLLLHGRNKRGGKCCRSSTQQHFHKNGCDATNSKPSHQHQHCCSDKLKKISQPKRCSSHECASKCQSSPTSASLGGNTKHTNTTEAHGKCKGSDEFHQHQHHNHQHCCSNEIKKVSQPEECASSKCASKCWSSPTNASIGENTNHTNAAHDKCKGSDEFHEPKHCHDGRCFKDTCQF 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00977 868 ProSitePatterns E1-E2 ATPases phosphorylation site. 393 399 IPR018303 -
Bva05g00977 868 SUPERFAMILY HAD-like 391 692 IPR036412 -
Bva05g00977 868 SFLD p-type atpase 374 643 IPR044492 -
Bva05g00977 868 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 4 826 - -
Bva05g00977 868 Gene3D - 4 78 - -
Bva05g00977 868 Pfam haloacid dehalogenase-like hydrolase 387 605 - -
Bva05g00977 868 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 4 826 - -
Bva05g00977 868 PRINTS Copper-transporting ATPase signature 313 327 - -
Bva05g00977 868 PRINTS Copper-transporting ATPase signature 569 586 - -
Bva05g00977 868 PRINTS Copper-transporting ATPase signature 182 200 - -
Bva05g00977 868 PRINTS Copper-transporting ATPase signature 626 640 - -
Bva05g00977 868 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 165 671 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva05g00977 868 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 142 694 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bva05g00977 868 CDD P-type_ATPase_HM 93 693 - -
Bva05g00977 868 SFLD Haloacid Dehalogenase 374 643 - -
Bva05g00977 868 SUPERFAMILY Calcium ATPase, transmembrane domain M 142 385 IPR023298 -
Bva05g00977 868 SUPERFAMILY HMA, heavy metal-associated domain 6 75 IPR036163 GO:0046872
Bva05g00977 868 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 142 695 - -
Bva05g00977 868 Pfam E1-E2 ATPase 197 369 - -
Bva05g00977 868 Gene3D - 382 642 IPR023214 -
Bva05g00977 868 Gene3D - 402 523 IPR023299 GO:0000166
Bva05g00977 868 Gene3D - 179 294 - -
Bva05g00977 868 SUPERFAMILY Calcium ATPase, transduction domain A 205 290 IPR008250 -
Bva05g00977 868 PRINTS P-type cation-transporting ATPase superfamily signature 240 254 - -
Bva05g00977 868 PRINTS P-type cation-transporting ATPase superfamily signature 615 627 - -
Bva05g00977 868 PRINTS P-type cation-transporting ATPase superfamily signature 537 547 - -
Bva05g00977 868 PRINTS P-type cation-transporting ATPase superfamily signature 391 405 - -
Bva05g00977 868 PRINTS P-type cation-transporting ATPase superfamily signature 591 610 - -
Bva05g00977 868 ProSiteProfiles Heavy-metal-associated domain profile. 10 76 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00977 Bva-Chr5 4984549 4990299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00977 6 855 Primary Pumps ATPases AT4G30110 61.079 0.0 1040
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00977 K01534 - gmx:100817567 1234.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00977 05 4984549 4990299 Bva05g00977 05 4984549 4990299 ECH