Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00959 ATGTCAAGCCCAGAGGGGGGAGTATCAACTGGGGAGGCAGTTGGTTTTGTTGCTGGAGTGGTTTTTATCACAAGATTTCTAATTGAATCCTTAATTACTGCAGTTGTGATTTTCGTGAAGATTGTTATTTTGGTTGTGGTATGCCGGGAAAGGGCTAAGATACGCAGCAAACCAGATAGTTCAGACCTAAATTTTCCAACCTTGACCATGGACAAGTTTCTGAATGATATGGAAAGAGAGAAGCCAATCAGATTTACTTCTCAGCAGCTAAGGATTGCAACTGACAACTACTCTAACATGCTGGGCTCTGGAGGCTTTGGAGCAGTGTACAAAGGGATATTTAGTAATGGAACCATTGTAGCAGTGAAGGTTCTATATGGGAGTTCTGACAAGAGAATCGATGATCAGTTCATGGCAGAAGTGAGTACAATTGGAAGAGTGCATCATTTTAATCTAGTCCGGCTATATGGATTTTGCTTTGAGAGGCACCTTAGAGCGCTGGTTTATGAGTACATGAGCAATGGCTCGCTTGACAAGTATTTGTTTTGTGAAAACAAGATGTTAGGATTTGAAAAGCTTCATGAGATTGCAGTTGGCACGGCCAGAGGCATCGCATACTTGCATGAAGAGTGCCAACAAAGGATAATTCACTATGACATAAAACCAGGAAATATACTCTTGGATCGTAAATTCTTTCCGAAAGTTGCTGACTTTGGTTTAGCCAAGCTTTGTAACAGAGACAATACTCATATAACAATGACAGGAGGGAGGGGGACTCCTGGTTATGCAGCACCAGAGCTTTGGATGCCATTTCCTATAACTCACAAGTGTGATGTTTACAGCTTTGGAATGCTATTGTTTGAAATTATAGGCAGAAGAAGGAACCTTGACATCAGCCTTCCAGAAAGCCAAGAATGGTTTCCAAGGTGGGTTTGGAAAAAATTTGATCTTGGACAAATGGGTGAGCTAATAATAGTATGTGGAATAGAGGAGAAGAATAGGGAGATTGTAGAGAGAATGGTTAAGGTAGCTCTCTGGTGTGTTCAGTATAGGCCTGAGTCAAGACCATTGATGAGTGATGTGGTGAAAATGTTGGAAGGCTTAGGGGAAATCCCAACACCTTTGAACCCTTTTGAGCACATGATGAATGGGACTCATCTTGCTTGTCCAGTCCAAGCAGCACAGACCTATACAAGTCTTGATTCCAGTTCTGCTATAACGACAACTAAATCCAGCATCTTATCTGCTACTCCTATCATGAGGAAATATGAGATTGAGCTAGCCTCTAGCTA 1292 0.418 MSSPEGGVSTGEAVGFVAGVVFITRFLIESLITAVVIFVKIVILVVVCRERAKIRSKPDSSDLNFPTLTMDKFLNDMEREKPIRFTSQQLRIATDNYSNMLGSGGFGAVYKGIFSNGTIVAVKVLYGSSDKRIDDQFMAEVSTIGRVHHFNLVRLYGFCFERHLRALVYEYMSNGSLDKYLFCENKMLGFEKLHEIAVGTARGIAYLHEECQQRIIHYDIKPGNILLDRKFFPKVADFGLAKLCNRDNTHITMTGGRGTPGYAAPELWMPFPITHKCDVYSFGMLLFEIIGRRRNLDISLPESQEWFPRWVWKKFDLGQMGELIIVCGIEEKNREIVERMVKVALWCVQYRPESRPLMSDVVKMLEGLGEIPTPLNPFEHMMNGTHLACPVQAAQTYTSLDSSSAITTTKSSILSATPIMRKYEIELASS 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00959 430 ProSitePatterns Protein kinases ATP-binding region signature. 101 123 IPR017441 GO:0005524
Bva05g00959 430 Gene3D Phosphorylase Kinase; domain 1 70 171 - -
Bva05g00959 430 ProSiteProfiles Protein kinase domain profile. 95 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00959 430 PANTHER PUTATIVE-RELATED 32 428 - -
Bva05g00959 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Bva05g00959 430 SUPERFAMILY Protein kinase-like (PK-like) 78 366 IPR011009 -
Bva05g00959 430 Pfam Protein tyrosine and serine/threonine kinase 98 365 IPR001245 GO:0004672|GO:0006468
Bva05g00959 430 Gene3D Transferase(Phosphotransferase) domain 1 172 373 - -
Bva05g00959 430 PANTHER RUST RESISTANCE KINASE LR10-RELATED 32 428 IPR045874 GO:0004672
Bva05g00959 430 SMART serkin_6 95 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00959 Bva-Chr5 4861155 4862515 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00959 84 378 Receptor kinase-like Gene Family AT5G38280 41.914 1.77e-76 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Bva05g00959 PK_Tyr_Ser-Thr 7.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00959 - - jre:109002952 635.565