Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00934 ATGAATTTCCATCCCAACACTTCTCTTCATCTAAGTCTCCCTGAGGAGAATAATCCACTCAACTTAGACCTTTTCCTTGagccatcttcttcttcttcatcttcacccACTGGTTCTTCCATTGAGCCACGGATTTTCTCGTGCAACTATTGCCAGAGGAAGTTTTACAGCTCGCAGGCACTGGGAGGGCACCAGAATGCTCACAAGCTGGAAAGGACACTGGCAAAGAAGAGCAGAGAGCTCAGTTCAGCCATGCAAAATGGTTATGGAGGATCATCAGAGCAGCGTTCATACCATGCTGGGCGTGTTGGATCGGACAACCCAGGACAAGTTAGTGGGAGAGTTGTTGCTGATGGAGAAAGCCATGGAAGGAGAGAAGTTGGGAATGGTTCGAAACAAAGAGTGATTGGATCTTGGTCCAGGGTTTATGGGTCTGAAAATGTTCATCAGGATGATATGAGCCAACTTGACTTGTCATTAAGGCTTTG 488 0.4406 MNFHPNTSLHLSLPEENNPLNLDLFLEPSSSSSSSPTGSSIEPRIFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELSSAMQNGYGGSSEQRSYHAGRVGSDNPGQVSGRVVADGESHGRREVGNGSKQRVIGSWSRVYGSENVHQDDMSQLDLSLRL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00934 162 Coils Coil 67 87 - -
Bva05g00934 162 MobiDBLite consensus disorder prediction 61 132 - -
Bva05g00934 162 Gene3D Classic Zinc Finger 29 99 - -
Bva05g00934 162 SUPERFAMILY beta-beta-alpha zinc fingers 43 73 IPR036236 -
Bva05g00934 162 PANTHER BNAC02G44440D PROTEIN 1 162 - -
Bva05g00934 162 MobiDBLite consensus disorder prediction 79 100 - -
Bva05g00934 162 PANTHER ZINC FINGER PROTEIN JAGGED 1 162 IPR045320 GO:0003700
Bva05g00934 162 ProSitePatterns Zinc finger C2H2 type domain signature. 48 68 IPR013087 -
Bva05g00934 162 ProSiteProfiles Zinc finger C2H2 type domain profile. 46 73 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00934 Bva-Chr5 4713920 4717042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00934 1 162 C2H2 Transcription Factor Family AT5G57520 51.479 6.79e-34 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva05g00934 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00934 - - gmx:100778014 167.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00934 05 4713920 4717042 Bva05g00934 05 4713920 4717042 ECH