Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00924 ATGGATGGTCCCGCTGCGACTCGAAACTCTACTACTGGGTCTACACCAGGTTCGGCACCTGGTTCTAACGATGAAAGCCGGcgtgttaaatttttatgtagcTTTCTGGGAAGTATAATGCCACGCCCCCAAGATGGGAAGCTCAGGTATGTTGGTGGAGAGACGCGAATTGTGAGTGTGCCGCGAGATATTAGTTATGAGGAGTTGATGAGTAAGATGAGAGAGTTGTATGAAGGGGCAGGAGTGTTGAAATACCAGCAGCCTGATGAGGATCTTGATGCCCTTGTTTCTGTGGtgaatgatgatgatgttgttAACATGATGGAAGAGTATGACAAGTTGGGTTCAGGTGATGGATTTACTAGGCTCaggatttttttgttttcgcACTGTGACCAAGATGGTTCTTCACACTTCATTGAGGGCCTGGGGGATGAGAGGGATACTGAGAGGAGGTACGTTGATgcattgaataatttaaatgacGCTTCTGATTTCAGAAAGCAACAACAACTGGAATTTGCTATGATTAACCCAAGAAGTGGTGAGATATCAATTCCACAGTATAACTTGCGTAATCTCACAATCCCTCCAATGGGATCAGGGCAGCACCAACAATCTATGACTCAGATGTATAATGAAATGGATGTACCATGGAGTCCTGCATATTATTCTCCTGGGCATCATGGTCACCATGACTCAAGATCACTGGTAGAATTTCCGCCTTCTCCTTCTGCTGCAAGGTGTCATATGCCATTTACAGAGTTACCAGATAAGTGCATTGATAGAGTACCTGAAGATTATGCCAGGCATCAGGTACATCACCATCATTTGTTTGATAATCAACCACAATATTCTGAAAATGTTGTGTGGTTGCCAACCGGAGCTGTTCCCAGTGAGAAGTCAGGTTTTCCAGGTAACATTCTTCATGGTCACAATGTCATTGATGGCAACAGTATATGTGAGCATTTCCGGATAAATTTTCAGAGAAGTCAACCACATCTGGAGCATCCTAACATCATTAGTAATGGACTTCCACCTATTGCTAATCAATGCAGAGAATCCCCTCCAAACAGGGACAGTTTCATGGTGAATGCTGATGCAAAGTTGCATCCTTTAATATATCCCAATGAGCAGCACAATGGTCAGAGTACTGTTTATAATGATACTCAGAATCATGAAAGAGGATTGATTTTGCCACCTCGGGTTGATGAAGCACGAGTGCATACCTCGGTATCTGGAAGAGTGAGTGATAACTATGCAGTTGATGGTCATGGCATAAATTTCCATCTTGTGCATTGTAATATGGCAGATGGACACCATGTGTCTTCCAATTATGTTCAACGAGCTAGCCCTGAATTAGGAGGAGAGGTGTTTCATGACCAAAATGTTGGTATGGCAACCCATCTTCAAATTCCTCCTCCAGAAGAGCACAGTGTGCATTATGCGAATGCAACTTCTCCTTATGAGATTGATAGTCAATACCCTGTGCCTCATGGCCATGTCTCTGGACATGGTTTCTGGAGAAACACTCCAACTCCAGTTCATCTGGGACCTTCTTATGAACCATCTAGTGCACCTCAGCCTGTGAATGGTATAATAAATGCAGCAGGATATCTCAGGGGAGAGGGAAGTCCAAGGCTTTATATTGGGGTTGATAGTCAAAATCCTTGGGTTGATTCCTCGCAGAAAATGTCTGGTCATGATAGGCCAGCTATCCCAGAATATCCTCATGTTCATGCTCTGAAATTGAACCCAATGGCCCTTGGGCAGGAAATTCAACAACCAGTTACTGTAGACACTGTTCATCCTCCACAGGAAAAGCTAAGTATTAGGATTCACATGGAACCAGTGCAGCTGTCAGACTCATCTTTTAATACAGTCGATAGCAAGGAGGTTTCAAGAAGTAATATTCAAGTGAATGACCCGATGAAGTTACAGTCTCGAAGTTTACTTGGTGGAAAAAAAGAGGCAGAAAATGTGGACAAGGTTGAGAACCTTAATGCACAGAGCATATCCTTTTcagagaaaagtaaaattgctGAGAATGATCTTGAAGCTACTGCTCTTGCGAAGGCTATCAACTTGAGTTCAAAACCTGCAACAGAGCATGATGTTGAAAAACCAGCTGATAAGGACCTTTGTGCTCCACAAGGTTCTAAGCTTTCAGTTAACAATTTCAGTTTGTTACCTGACCTGATTGCTTCTGTAAAGAGGGCTGCATTAGAAGGTTCTGAGGAGCGTGTTAATTCTGAGATGCCTGATTCAACAACTAAAGAAGAAGCTGCAAATGAAGTACCATCAGCGAATGATCATGGTGATATGGAAATGGACTCTGATAATGACAATGTCGATACTTCTAAAATTGAGCCCACAAAAGCTGAGGAAGAAGCTATTGCCAGGGGATTACAGacaattaaaaatgatgatttgGAAGAGATCCGGCAACTAGGTTCTGGAACTTATGGGGCTGTTTATCATGGGAAATGGAAAGGTTCTGATGTTGCAATAAAGAGAATTAAAGCCAGTTGTTTTTCTGGAAGGCCAtctgaaagagaaagattgATTGCGGATTTCTGGAAAGAGGCATTGATGCTGAGTTCGTTACATCATCCAAATGTTGTCTCCTTCTATGGCATTGTCCGTGATGGCCCTGATGGTTCTTTAGCTACGGTGACAGAATTCATGATTAACGGATCTTTGAAACAGTTCTTGCATAAGAAAGATAGAACGATTGATCGTCGTAAGAGGATAATCATAGCCATGGATGCTGCATTTGGGATGGAGTATCTGCACGGAAAGAACATTGtgcattttgatttgaaatgtgagaatCTATTAGTCAATATGAGAGATCCACAACGACCTGTTTGCAAGATTGGCGATTTGGGTTTATCCAAGGTAAAACAACACACACTAGTGTCAGGTGGTGTACGGGGAACTTTGCCTTGGATGGCACCTGAACTCCTTAGCGGAAAAACCAATATGGTGTCAGAGAAGATTGATGTTTACTCTTTCGGGATTGTCATGTGGGAATTGCTCACTGGGGAGGAACCCTATGCTGATATGCATTGTGCTTCAATAATAGgAGGAATTGTGAACAACACATTACGTCCCCAAATCCCCACATGGTGTGATCCTGAGTGGAAGTCACTAATGGAAAGTTGTTGGTCCTCAGATTCTGCGGAGAGGCCATCGTTTTCAGAAATTTCTAAGAAGCTGAGGAGTATGGCTGCTGCAATGAATGTGAAATA 3254 0.4118 MDGPAATRNSTTGSTPGSAPGSNDESRRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSVPRDISYEELMSKMRELYEGAGVLKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSGDGFTRLRIFLFSHCDQDGSSHFIEGLGDERDTERRYVDALNNLNDASDFRKQQQLEFAMINPRSGEISIPQYNLRNLTIPPMGSGQHQQSMTQMYNEMDVPWSPAYYSPGHHGHHDSRSLVEFPPSPSAARCHMPFTELPDKCIDRVPEDYARHQVHHHHLFDNQPQYSENVVWLPTGAVPSEKSGFPGNILHGHNVIDGNSICEHFRINFQRSQPHLEHPNIISNGLPPIANQCRESPPNRDSFMVNADAKLHPLIYPNEQHNGQSTVYNDTQNHERGLILPPRVDEARVHTSVSGRVSDNYAVDGHGINFHLVHCNMADGHHVSSNYVQRASPELGGEVFHDQNVGMATHLQIPPPEEHSVHYANATSPYEIDSQYPVPHGHVSGHGFWRNTPTPVHLGPSYEPSSAPQPVNGIINAAGYLRGEGSPRLYIGVDSQNPWVDSSQKMSGHDRPAIPEYPHVHALKLNPMALGQEIQQPVTVDTVHPPQEKLSIRIHMEPVQLSDSSFNTVDSKEVSRSNIQVNDPMKLQSRSLLGGKKEAENVDKVENLNAQSISFSEKSKIAENDLEATALAKAINLSSKPATEHDVEKPADKDLCAPQGSKLSVNNFSLLPDLIASVKRAALEGSEERVNSEMPDSTTKEEAANEVPSANDHGDMEMDSDNDNVDTSKIEPTKAEEEAIARGLQTIKNDDLEEIRQLGSGTYGAVYHGKWKGSDVAIKRIKASCFSGRPSERERLIADFWKEALMLSSLHHPNVVSFYGIVRDGPDGSLATVTEFMINGSLKQFLHKKDRTIDRRKRIIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVKQHTLVSGGVRGTLPWMAPELLSGKTNMVSEKIDVYSFGIVMWELLTGEEPYADMHCASIIGGIVNNTLRPQIPTWCDPEWKSLMESCWSSDSAERPSFSEISKKLRSMAAAMNVK 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00924 1084 CDD PB1_UP2 32 128 - -
Bva05g00924 1084 ProSitePatterns Protein kinases ATP-binding region signature. 817 838 IPR017441 GO:0005524
Bva05g00924 1084 Gene3D - 47 130 - -
Bva05g00924 1084 CDD STKc_MAP3K-like 817 1074 - -
Bva05g00924 1084 MobiDBLite consensus disorder prediction 744 793 - -
Bva05g00924 1084 MobiDBLite consensus disorder prediction 1 22 - -
Bva05g00924 1084 MobiDBLite consensus disorder prediction 1 25 - -
Bva05g00924 1084 Gene3D Phosphorylase Kinase; domain 1 797 896 - -
Bva05g00924 1084 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 11 1084 - -
Bva05g00924 1084 PANTHER - 11 1084 - -
Bva05g00924 1084 PRINTS Tyrosine kinase catalytic domain signature 1045 1067 IPR001245 GO:0004672|GO:0006468
Bva05g00924 1084 PRINTS Tyrosine kinase catalytic domain signature 1001 1023 IPR001245 GO:0004672|GO:0006468
Bva05g00924 1084 PRINTS Tyrosine kinase catalytic domain signature 893 906 IPR001245 GO:0004672|GO:0006468
Bva05g00924 1084 PRINTS Tyrosine kinase catalytic domain signature 930 948 IPR001245 GO:0004672|GO:0006468
Bva05g00924 1084 SUPERFAMILY CAD & PB1 domains 45 134 - -
Bva05g00924 1084 ProSitePatterns Serine/Threonine protein kinases active-site signature. 936 948 IPR008271 GO:0004672|GO:0006468
Bva05g00924 1084 ProSiteProfiles Protein kinase domain profile. 811 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00924 1084 SMART serkin_6 811 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00924 1084 Pfam PB1 domain 44 128 IPR000270 GO:0005515
Bva05g00924 1084 Pfam Protein tyrosine and serine/threonine kinase 812 1074 IPR001245 GO:0004672|GO:0006468
Bva05g00924 1084 SMART PB1_new 43 128 IPR000270 GO:0005515
Bva05g00924 1084 Gene3D Transferase(Phosphotransferase) domain 1 897 1084 - -
Bva05g00924 1084 SUPERFAMILY Protein kinase-like (PK-like) 803 1072 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00924 Bva-Chr5 4670931 4677117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00924 23 1084 MAP Kinase Kinase Kinase AT5G57610 53.805 0.0 1059
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Bva05g00924 PK_Tyr_Ser-Thr 1.7e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00924 - - gmx:100779077 1436.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00924 05 4670931 4677117 Bva06g00891 06 7721331 7727086 BWGD
Bva05g00924 05 4670931 4677117 Bva05g00924 05 4670931 4677117 ECH