Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00914 ATGGGAATTGAGCGAGGAGGCCTCAAGGGCTTTAGGAGCGGGTGGAGCATGCCGGCGAAGCCGTGTGACTCCTGCAAatcggcggcggcggcggtcTTCTGCCGCGCGGATTCGGCGTTCCTATGCATGGGGTGCGATAACAAAATCCACTGCGCCAATAAGCTGGCTTCCCGCCACGAGCGTGTGTGGATGTGCGAGGTGTGCGAACAAGCCCCCGCCTCCGTCACGTGCAAAGCTGACGCGGCCGCTCTGTGCGTCACGTGCGATTCCGATATCCACTCGGCCAATCCTCTAGCACGTCGCCACGAGCGTGTTCCGGTGGAGCCATTCTTCGACTCGGCAGAGTCGATGGTGAAATCCTCGGCCTCGGCAGCCTTTAACTTCCTTGTTCCAACCGATGATGGAATTGGGTCTGATGGGTTCAACCAGGAAGATTCGGAAGCAGCGTCGTGGCTTATTCCCAACCTGAATTTCAATTCGAAGTTGGTAGACGGTCCGGATCATATCAAGTCcggagaaatatttttctccgAAATGGATCCATTTCTGGAATTTGATTACTCAAATTCATTTCAGAATAACAACAGCGCCGTTAACGATAGCGTAGTGCCAGTCCAGAGCAAACCCACTCCGTTGCCCGTTGCGAATCACTCCGAGACTTGCTTCGACATCGATTTTTGCAGATCCAAGCTATCTTCTTTTAGTTACCCAACTCATTCAATTAGCCAAAGCgTTTCGTCTTCTTCGCTCGACGTTGGAGTGGTTCCGGAGGGAAACTCGGTTTCGGAGATTTCATACTCTTTGGGCAGAAACAGTTCGGATTCAAGCGGAATGGGAAATATTAACCAAGCGAATCAATTATGCGGTATGGACCGGGAAGCGAGGGTGTTGAGATAcagagagaagaggaagaacagaaaatttgagaaaaccATTCGCTACGCTTCCAGAAAGGCATATGCCGAAACCCGCCCAAGAATTAAGGGCCGGTTCGCCAAACGGACCGAAATCGATTCGGACGTGGACCGCCTCTATGGCTCTGCGGCCGTGGCTCCTTCATCCCTGATGCTGGACGCTCAATATGGCGTCGTACCTTCGTTTTA 1103 0.4905 MGIERGGLKGFRSGWSMPAKPCDSCKSAAAAVFCRADSAFLCMGCDNKIHCANKLASRHERVWMCEVCEQAPASVTCKADAAALCVTCDSDIHSANPLARRHERVPVEPFFDSAESMVKSSASAAFNFLVPTDDGIGSDGFNQEDSEAASWLIPNLNFNSKLVDGPDHIKSGEIFFSEMDPFLEFDYSNSFQNNNSAVNDSVVPVQSKPTPLPVANHSETCFDIDFCRSKLSSFSYPTHSISQSVSSSSLDVGVVPEGNSVSEISYSLGRNSSDSSGMGNINQANQLCGMDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEIDSDVDRLYGSAAVAPSSLMLDAQYGVVPSF 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00914 367 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 8 367 IPR045281 GO:0009909
Bva05g00914 367 ProSiteProfiles CCT domain profile. 292 334 IPR010402 GO:0005515
Bva05g00914 367 CDD Bbox1_BBX-like 65 107 - -
Bva05g00914 367 ProSiteProfiles Zinc finger B-box type profile. 17 64 IPR000315 GO:0008270
Bva05g00914 367 SMART bboxneu5 65 107 IPR000315 GO:0008270
Bva05g00914 367 SMART bboxneu5 17 64 IPR000315 GO:0008270
Bva05g00914 367 CDD Bbox1_BBX-like 21 64 - -
Bva05g00914 367 ProSiteProfiles Zinc finger B-box type profile. 60 107 IPR000315 GO:0008270
Bva05g00914 367 Pfam CCT motif 292 334 IPR010402 GO:0005515
Bva05g00914 367 Pfam B-box zinc finger 62 107 IPR000315 GO:0008270
Bva05g00914 367 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 5 8 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00914 Bva-Chr5 4620410 4622132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00914 1 367 C2C2-CO-like Transcription Factor Family AT5G57660 56.267 4.72e-129 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bva05g00914 zf-B_box 4.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00914 - - gmx:100805693 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00914 05 4620410 4622132 Bva05g00914 05 4620410 4622132 ECH