Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00913 ATGTTATCTTCTGCCCCTTCTAAAATACTCATTGGGCTTTCCTTGGACATAGATGACAGCAAAGAGCTTCTCTCGTGGGCAATCAGTGTTCTAGCACGTCCAAATGACACCATTGTGGCCGTGAATGTTCTTGTGACTAAtgataagaagaagaagcacgTCTCATTCAGAAGAAGACAATCACAACTTCGGCAGGCTAAAGCCTATGTCATATCTTTGCTGGGAGAGTTTGCTAGGATCTGTTGGACTAAGCAGGTTAATTTGGAGGCGAGAGTGGCACTTAGTTCCACAGTAGGTGGAGGTCTTGTTGAGGAAGCAAAGTCCATCTCAGcagattttcttcttcttcgtgGCTCAAGAAATCAaagcaataataataaGACTAAGACATTTAAAGGAATTACCAACTACTGTTTAGAGCACGTACCCCAATGCTGCACGTTAATCTCAGTTGGGAAATCAGCCAATATACAGGAAGATTCAACTCCGAATTCTGCACATTCTCaagATGATACTGAATTAAGTTCAAGGTGGATAGACAAGGATAAGCAAAGTGACATGGCTGCCTTCCCTGTTGTTAATCTAAAGCAGTTTCTGTCAGAAACAAAGATTCAAAACTGCTCACCAAGAACAGTACTAGAGGCATTTGAGGGACAATCTAACAGCACAGAAGATGATACTTTTAGCACTAGGGTCTCAAGCATCACAGATACCTCGCTGCCACCTAAGgttaataaaagaagaaaacccaaGTCACCATTCCGAATCATTGCCTCACTCCTTGCCTCACCATTTCGAAGAAAAAGCAGGACAATTTCCAAGAACCAAAAGCAGCAGCCTTTATTGAAGTGCTTCAGCTACTTGGAGATCTCTACTGCAACAAGAGACTTCAGCCAAGATAATTTAGTAGGAAAAGGTGGGTACTCAGAGGTATACAGAGGTGATCTTCGTAATGGACAAAGCATTGCTGTGAAGAGGCTGGCCAAGGACAACAATGATCCCAACAAGGAAAAGGAGTTCCTCATGGAACTGGGTGTAATTGGACATGTCTGCCATCCTAATACTGCTACTTTAGTTGGTTACTGCATTGAACATGGACTCTATCTCATTTTCAATTACTCACAAAATGGAAACTTGGCAACTGCTTTGCATGGTAAAACAGGAAACTCACTCGAGTGGCCAATCAGATATAAGATTGCCATTGGAGTTGCAAGGGGCCTCCATTATCTTCATAAATGTTGCCAACGCCGAATAATTCATCGTGATATTAAAGCCTCAAATGTTCTTCTAAGTCCAGATTATGAACCACAGATTACTGATTTTGGACTTGCAAAGTGGCTTCCCAACAAGTGGACTCACCATGCTGTAATCCCCATTGAGGGCACATTTGGATACTTAGCTCCAGAGTATTTCATGCATGGAATAGTAGATGAGAAAACAGATGTTTATGCATTTGGAATTCTTCTTCTGGAGATTGTAACTGGGAGAAGACCGGTTGATTCTTCAAAGCAAAACCTTCTCCTTTGGGCAAAGCCTCTGATGGAATCTGGTAACATTGCTGAACTAGCTGATCCAAGATTGGAAGGTAAATATGATGAAGAGCAATTGTATACGCTCGTCCTAACAGCCTCATACTGTGTGAAACAACCTGCTACATGGCGTCCCCCAATGAGCGAGgTGTTAGAGCTGCTAACGAGCAACAAACACTCAGAGGCTGGAAGAAAGAGTTGGAGGATACCAAACTTCACATCAGACGAATTGGATGATTACTCCATGGTTTTCGGATACAAGGTCCCTTCAGACATATCTCTCGAGGATTTCTTGTG 1826 0.4096 MLSSAPSKILIGLSLDIDDSKELLSWAISVLARPNDTIVAVNVLVTNDKKKKHVSFRRRQSQLRQAKAYVISLLGEFARICWTKQVNLEARVALSSTVGGGLVEEAKSISADFLLLRGSRNQSNNNKTKTFKGITNYCLEHVPQCCTLISVGKSANIQEDSTPNSAHSQDDTELSSRWIDKDKQSDMAAFPVVNLKQFLSETKIQNCSPRTVLEAFEGQSNSTEDDTFSTRVSSITDTSLPPKVNKRRKPKSPFRIIASLLASPFRRKSRTISKNQKQQPLLKCFSYLEISTATRDFSQDNLVGKGGYSEVYRGDLRNGQSIAVKRLAKDNNDPNKEKEFLMELGVIGHVCHPNTATLVGYCIEHGLYLIFNYSQNGNLATALHGKTGNSLEWPIRYKIAIGVARGLHYLHKCCQRRIIHRDIKASNVLLSPDYEPQITDFGLAKWLPNKWTHHAVIPIEGTFGYLAPEYFMHGIVDEKTDVYAFGILLLEIVTGRRPVDSSKQNLLLWAKPLMESGNIAELADPRLEGKYDEEQLYTLVLTASYCVKQPATWRPPMSEVLELLTSNKHSEAGRKSWRIPNFTSDELDDYSMVFGYKVPSDISLEDFL 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00913 608 CDD USP_Like 8 149 - -
Bva05g00913 608 ProSiteProfiles Protein kinase domain profile. 297 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00913 608 SMART serkin_6 297 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00913 608 ProSitePatterns Protein kinases ATP-binding region signature. 303 325 IPR017441 GO:0005524
Bva05g00913 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Bva05g00913 608 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 7 144 - -
Bva05g00913 608 SUPERFAMILY Protein kinase-like (PK-like) 273 564 IPR011009 -
Bva05g00913 608 Gene3D HUPs 2 150 IPR014729 -
Bva05g00913 608 PANTHER OS08G0249100 PROTEIN 6 598 - -
Bva05g00913 608 MobiDBLite consensus disorder prediction 218 249 - -
Bva05g00913 608 Pfam Protein kinase domain 298 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00913 608 Gene3D Phosphorylase Kinase; domain 1 258 373 - -
Bva05g00913 608 PANTHER OS08G0249100 PROTEIN 6 598 - -
Bva05g00913 608 MobiDBLite consensus disorder prediction 218 241 - -
Bva05g00913 608 Gene3D Transferase(Phosphotransferase) domain 1 375 582 - -
Bva05g00913 608 Pfam Universal stress protein family 8 144 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00913 Bva-Chr5 4613939 4616934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00913 254 604 Receptor kinase-like Gene Family AT1G53420 39.782 3.86e-72 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bva05g00913 PK_Tyr_Ser-Thr 5.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00913 - - gmx:100782832 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00913 05 4613939 4616934 Bva05g00913 05 4613939 4616934 ECH