Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00912 ATGGGATCCTCTTTCAGTTGCTGTGGTCCAGAAAAGGTCGAAGAAATGCCACCAACAGCTGGTGTGGTTAACAATTCATGGAGAATATTCACGTACAAGGAGTTGCACAATGCCACAAACGGTTTCAGTGATGATAATAAACTTGGCGAAGGTGGCTTTGGAAGTGTCTACTGGGGAAAAACAAGTGATGGTCTCCAGATAGCtgtgaagaaattgaaagcaaTGAACACCAAGGCAGAGATGGAATTCGCAGTGGAAGTGGAAGTTCTTGGAAGGGTTCGGCACAAAAATTTGCTGGGTCTGAGAGGTTATTGTGCTGCGGCTGAGCAACGGCTCATAGTCTATGATTACATGCCAAATTTGAGCTTACTTTCTCATCTCCATGGCCAATTTGCTGGTGAAGTTCAACTGGATTGGAAACTGAGAATGAAGATTGCTATTGGCTCCGCAGAAGCCTTATTGTACTTACATCATGAAATAACACCACACATAATTCATAGAGATATCAAAGCAAGTAATGTAttgttaaattcaaattttgaaccTCTAGTTGCTGATTTTGGGTTTGCAAAGCTAATCCCGGAAGGAGTTAGTCATATGACTACTCGTGTTAAAGGTACTTTGGGATATTTAGCACCTGAATATGCTATGTGGGGAAAGATTTCTGAAAGTTGTGATGTTTATAGCTTTGGAATTCTTCTCTTGGAACTGGTCACCGGAAGAAAACCCATAGAAAAACTCCCCGGTGGGGTTAAGAGAACAATAACTGAATGGGCTGAGCCATTGATTACCAGAGGAAAGCTCACGGATATGGTTGATCCAAAACTTAGAGGAAACTTCGATGAAAAGCAAGTGAAACAAGCTATCAATGTGGCTGCTCTTTGTGTGCAAAGCGAGCCTGAGAGGCGACCCAACATGAAGCAAGTGGTTAACCTTCTTAAAGGTTATGAACCTGATGACAAAGTCAAATTGATCCATACAAGGATAGACActgtaaaatataatgaagaaCCACTGGCACGAGACCAAACAGATGACGACGATGACGATGGAACCAACGGCTATGGTGTTTTTAGTGCCCTTCAGGTGCAAAAGATGTATGCATG 1106 0.4069 MGSSFSCCGPEKVEEMPPTAGVVNNSWRIFTYKELHNATNGFSDDNKLGEGGFGSVYWGKTSDGLQIAVKKLKAMNTKAEMEFAVEVEVLGRVRHKNLLGLRGYCAAAEQRLIVYDYMPNLSLLSHLHGQFAGEVQLDWKLRMKIAIGSAEALLYLHHEITPHIIHRDIKASNVLLNSNFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKISESCDVYSFGILLLELVTGRKPIEKLPGGVKRTITEWAEPLITRGKLTDMVDPKLRGNFDEKQVKQAINVAALCVQSEPERRPNMKQVVNLLKGYEPDDKVKLIHTRIDTVKYNEEPLARDQTDDDDDDGTNGYGVFSALQVQKMYA 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00912 368 Gene3D Phosphorylase Kinase; domain 1 15 117 - -
Bva05g00912 368 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 1 366 - -
Bva05g00912 368 ProSiteProfiles Protein kinase domain profile. 42 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00912 368 SUPERFAMILY Protein kinase-like (PK-like) 26 323 IPR011009 -
Bva05g00912 368 MobiDBLite consensus disorder prediction 336 355 - -
Bva05g00912 368 Gene3D Transferase(Phosphotransferase) domain 1 118 328 - -
Bva05g00912 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Bva05g00912 368 CDD STKc_IRAK 48 315 - -
Bva05g00912 368 PANTHER OS01G0750732 PROTEIN 1 366 - -
Bva05g00912 368 Pfam Protein kinase domain 43 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00912 368 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524
Bva05g00912 368 SMART serkin_6 42 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00912 Bva-Chr5 4610378 4611803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00912 18 313 Trihelix Transcription Factor Family AT1G70460 48.000 6.17e-93 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Bva05g00912 Pkinase 7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00912 - - gmx:100783365 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00912 05 4610378 4611803 Bva05g00912 05 4610378 4611803 ECH