Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00909 ATGGCAAAGTACTCAGACTACCTTGTTTCTtggtttctctttcttcttcttttgcagATAGAAACTGGAATTAATGGGTCAAACGCAGAAAGTGCAACTTCCATGGGTGTGATCAAATTGAGAATAGGTGTTCCCAAGAAAGACGGTTTCACCCAATTTGTCAATGTACTTTGGAAGCAACGCGAGAACAAGTACAATGTCTCTGGATATTGCATAGATGTTTTCAACGCCGTCATGAAGGTCTTACCTCTCAACGTTTCTCCTGAATTTGAACCTTACGTCAATGAAACAGGACACAGTGCAGGGACCTACGATTCACTTGTCCAACAAATTCCTGAAAATAAGTATGATGCAGTAGTAGGAGATGTAACAATCGTGGCCAACCGTTCAAACTTTGTTGATTTTACATTGCCATATACCGAGTCAGATGTGTGCATGCTGGTCCCAATTCAACATGGGAAGCACTCGAGCATGTGGATTTTTGTGAGACCCTTCGCCTGGGATCTTTGGCTCTGCATAGTCATTCTCAACATCTTCACAGGGCTTGTCATACACATCATGGAACGAAATGCACATAATGTGTCTGCTGATGGTTCGCCTATTCGCAAAGATCTCAGAATAGTGACCATCTTATGGTTTCCATTAGCACAAGCCGTGCTTCCcgaaaGAGAGGTAGTTGTGAAGACCTGCTCGAGATTTGTGTTGATGGTTTGGTTACTATTAGCCTTCGTCCTAATGCAAAGTTACACAGCAAACTTGACGTCTATTTTGACGTTAGATCAGCTGCAACCTTCTTATCTCAAAGTTATTgatctgaaaaagaaaggatattACGTTGGATATCAAACTGATTCTTTTGTCCAAGGTCTTTTGGTGCAGAGATTGAAGTTTGACCCATCCAAGCTTAGGGCATATAGCAATATTTCTGAGTATCACCATGCCTTGAAACTTGGAAGCGAAGGAGGAGGTGTTGCAGCTATATTTGATGAACTACCCTATCTCAAAGTCTTCCTCAAAAAATTTGGGTCCAATTACATGATGGCTGGAGCTACATATCGAACAGATGGATTTGGTTTTgCGTTCCCGCGTAACTCCAATCTCACATCTTACTTTTCGAGAGCCATCTTAAACGTGACCGAGAGTGATATAATGGATGAGATTGAGCataaatattttggaaaaGATGATGGAGTCCAAGATCAATCTGGTTCAATCTCGTCTGATACTCCAAGCCTGACGTCTCGCAGCTTTGCAGGGCTCTTCTTAATCACGGGAATAGCTACGCTACTGGCACTGGCCATCTCAGAAAGTGTCACTTTGCAGAAACCTATTTTAATGGCTAGACATTATAGTCAAAGATATTTCGGTAATTGGAGGAGTTCTAGAGTTAGAGATGATTCTACAACAGAAACGGGAAGAGATGTTGGTTCCAGTTCAAAAAACTG 1445 0.4021 MAKYSDYLVSWFLFLLLLQIETGINGSNAESATSMGVIKLRIGVPKKDGFTQFVNVLWKQRENKYNVSGYCIDVFNAVMKVLPLNVSPEFEPYVNETGHSAGTYDSLVQQIPENKYDAVVGDVTIVANRSNFVDFTLPYTESDVCMLVPIQHGKHSSMWIFVRPFAWDLWLCIVILNIFTGLVIHIMERNAHNVSADGSPIRKDLRIVTILWFPLAQAVLPEREVVVKTCSRFVLMVWLLLAFVLMQSYTANLTSILTLDQLQPSYLKVIDLKKKGYYVGYQTDSFVQGLLVQRLKFDPSKLRAYSNISEYHHALKLGSEGGGVAAIFDELPYLKVFLKKFGSNYMMAGATYRTDGFGFAFPRNSNLTSYFSRAILNVTESDIMDEIEHKYFGKDDGVQDQSGSISSDTPSLTSRSFAGLFLITGIATLLALAISESVTLQKPILMARHYSQRYFGNWRSSRVRDDSTTETGRDVGSSSKN 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00909 481 Gene3D - 342 399 - -
Bva05g00909 481 PANTHER RECEPTOR 3.3, PUTATIVE-RELATED 1 456 - -
Bva05g00909 481 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 456 - -
Bva05g00909 481 SMART GluR_14 39 394 IPR001320 GO:0015276|GO:0016020
Bva05g00909 481 CDD GluR_Plant 39 392 - -
Bva05g00909 481 Pfam Bacterial extracellular solute-binding proteins, family 3 64 394 IPR001638 -
Bva05g00909 481 Pfam Ligand-gated ion channel 395 427 IPR001320 GO:0015276|GO:0016020
Bva05g00909 481 SUPERFAMILY Periplasmic binding protein-like II 39 395 - -
Bva05g00909 481 Gene3D - 158 294 - -
Bva05g00909 481 Gene3D - 33 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00909 Bva-Chr5 4593326 4595104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00909 39 453 Ion Channels AT5G11210 38.702 7.40e-92 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00909 K05387 - gmx:100811144 556.984