Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00904 ATGCTTTCTCGATCTTCCTTGGACTTATTGAGTTTGGTTTCCGTCGATGATTACAGTACATTGAGTCGAATCCCCAGAGTCATGACGGTCCCCGGAGTTATATCGGAATTTGAAATCGACGACGAGGAGCGTGCTAATTCCGGGTCCGGATCCGACGAGGTTATTTCCTCTGCTCCGCAAGAACGCAGAATCATCGTGGCTAACCAGTTGCCTATTCGCGCCTCTCGCGATGCCGACACAAAGAAATGGAGTTTCGAATTGGACAGTGATAGTTTAGTACTGCAGCTCAAAGACGGGTTCCCCCCTGACGTGGAAGTTTTATACATCGGTTCCTTGAAGGCGGAGATCGATGCGACAGAACAGGATGAGGTGGCACAAGTCTTGCTGGATAAGTTCCGGTGCGTACCAACTTTCTTGCCTGCAGAAATTCAGAACAAGTACTACCATGGATTCTGCAAGCATTACCTTTGGCCTTTGTTTCACTATATGTTGCCCATGTCGCACAGTCACGGTGCCCGTTTCGACCGTGCACAGTGGCGGGCCTATGTATTGGCGAACAAGATTTTCGCAGATAAGGTAACGGAGGTGATAAACCCAGATGAGGATTTCGTTTGGGTTCATGATTATCATCTTATGATATTGCCCACCTTTCTGAGAAAACGGTTCCATCGGGTTAAGCTCGGGTTCTTCTTGCATAACCTGTTTCCGTCCTCGGAAATCTATAGGACTATACCGGTTCGGGACGATATCCTTCGGGCGTTATTAAATTGTGATTTAGTCGGATTTCACACTTTTGATTACGCAAGACATTTCTTGACCTGTTGTAGTAGGATGTTGGGTCTTGATTACGAGTCTAAGAGGGGTTACATTGGCCTAGATTACTATGGTCGAACGGTGACGATTAAGATCTTGCCGGTTGGGATTCACATGGGTCAGCTTGAATCCGTCTTATCCTTATCTCACACTGCTTACAAGATTAAGGAATTGAAGAAACAATTTGAGGGGAAAATTGTCATTTTGGGTGTGGATGACATGGACTTATTTAAAGGTATTACCTTGAAGTTCTTAGCAATGGGGCAACTTTTGCAAGTGCACCAGGAGTTGATAGGTAAAGTGGTCTTAGTTCAGATTCTAAACCCTGCAAGGAGCAGAGGTAAAGATATTGAGGATGTTCAGAACGAGGTGAATGATATAACTAAAGAGATCAACCAAAAATATGGTAAACCAGGATACCAGCCGATCATCTTAATCAATGGCCCTGTGTCAACACTGGAGAAAGCTGCATATTACGCCATTTCCGAGTGTTGTGTAGTGAATGCTGTAAGAGATGGGATGAATCTGATGCCTTATGAGTACACTGTTTGCAGACATGGGACCCTTGCTTTGGACAAGGAATTTGGAGTTGACGATGGATCGGCAACTCCTAAACGGAGTGTTATTATTGTGTCTGAATTCATCGGGTGCTCGCCGTCTCTAAGTGGAGCAATCCGGGTGAATCCGTGGAACATTGATGATGTCTCTGAGGCCATGAATTCGGCTATCACATTGCCAGAGGCAGAGAAGCATTTGCGGCATGAGAAGCATTATAAGTACATTAGTTCTCATGATGTAGCTTATTGGGCTCGGAGTTTTGACCAGGATTTAGAGAGAGCTTGCAGGGAGCACTACCGTAAGAGGTATTGGGGTGTGGGCTTTGGCTTGGGATTCAGAATTGTTGCTTTGGATCCTACATTTAGGAAGCTTTCAGTGGATAACATTGTCTCTGCCTACAAAGATACACATAGTAGATTAATCCTTTTGGACTATGATGGCACTATGATGCCACATGCTTCGATCAACAAAACTCCGAGCAGCGAAGTGATTTCTGTCTTGAATTGTTTGTGCAGTGATCCCAGAAACATAGTTTTCATTGTGAGTGGCAGAGATAAGGATTGCCTGAGCAAATGGTTTTCTCCATGTCCCAAGTTGGGTCTCTCTGCAGAGCATGGTTTCTTCACCAGGTTTAGAAGGGATTCCCCTTTGGAGACCTGTGGATTAACGATGGATTTTGATTGGAAAAAGATTGCGGAACCTGTAATGGCGCTTTATACCGAAGCAACTGATGGTTCTTTCATTGAACAAAAGGAAAGTGCACTGGTGTGGCACTATCAAGAAGCTGACCCCTATTTTGGTTCATGCCAAGCCAAAGAGCTTCTGGATCACCTGGAGAGTGTGCTTGCTAATGAACCAGTTGTCGTTAAAAGAGGACAACATATAGTTGAAGTAAAACCTCAGGGTGTGAGCAAAGGCATAGTTGTGGAAAACCTTATCTCAACGATGCGAACTAGGGAAAAATCGCCAGATTTTCTGCTATGCATTGGGGATGATCGCTCAGACGAAGACATGTTTGAGAGCATTTCTCGAACTGTTTCTAATCCAAATCTACCAACGATAGAACAAGTGTTTGCATGCACTGTAGGTCAGAAACCAAGCATGGCAAAATACTATCTGGATGATACTACAGAAGTCATCAAGTTGCTTCAAGGGCTTGCTACTGCATCAGGACAACCTAAGACGAAAGATTTTCTCGAATTGCAAGATTCTCTATA 2588 0.4444 MLSRSSLDLLSLVSVDDYSTLSRIPRVMTVPGVISEFEIDDEERANSGSGSDEVISSAPQERRIIVANQLPIRASRDADTKKWSFELDSDSLVLQLKDGFPPDVEVLYIGSLKAEIDATEQDEVAQVLLDKFRCVPTFLPAEIQNKYYHGFCKHYLWPLFHYMLPMSHSHGARFDRAQWRAYVLANKIFADKVTEVINPDEDFVWVHDYHLMILPTFLRKRFHRVKLGFFLHNLFPSSEIYRTIPVRDDILRALLNCDLVGFHTFDYARHFLTCCSRMLGLDYESKRGYIGLDYYGRTVTIKILPVGIHMGQLESVLSLSHTAYKIKELKKQFEGKIVILGVDDMDLFKGITLKFLAMGQLLQVHQELIGKVVLVQILNPARSRGKDIEDVQNEVNDITKEINQKYGKPGYQPIILINGPVSTLEKAAYYAISECCVVNAVRDGMNLMPYEYTVCRHGTLALDKEFGVDDGSATPKRSVIIVSEFIGCSPSLSGAIRVNPWNIDDVSEAMNSAITLPEAEKHLRHEKHYKYISSHDVAYWARSFDQDLERACREHYRKRYWGVGFGLGFRIVALDPTFRKLSVDNIVSAYKDTHSRLILLDYDGTMMPHASINKTPSSEVISVLNCLCSDPRNIVFIVSGRDKDCLSKWFSPCPKLGLSAEHGFFTRFRRDSPLETCGLTMDFDWKKIAEPVMALYTEATDGSFIEQKESALVWHYQEADPYFGSCQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGIVVENLISTMRTREKSPDFLLCIGDDRSDEDMFESISRTVSNPNLPTIEQVFACTVGQKPSMAKYYLDDTTEVIKLLQGLATASGQPKTKDFLELQDSL 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00904 862 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 851 IPR001830 GO:0003824|GO:0005992
Bva05g00904 862 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 62 553 - -
Bva05g00904 862 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 11-RELATED 1 851 - -
Bva05g00904 862 TIGRFAM T6PP: trehalose-phosphatase 595 844 IPR003337 GO:0003824|GO:0005992
Bva05g00904 862 Pfam Trehalose-phosphatase 599 833 IPR003337 GO:0003824|GO:0005992
Bva05g00904 862 Gene3D Glycogen Phosphorylase B; 315 533 - -
Bva05g00904 862 Gene3D Glycogen Phosphorylase B; 55 314 - -
Bva05g00904 862 Gene3D - 725 856 IPR023214 -
Bva05g00904 862 Gene3D - 595 706 IPR023214 -
Bva05g00904 862 CDD HAD_TPP 597 838 - -
Bva05g00904 862 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 597 802 IPR006379 -
Bva05g00904 862 Coils Coil 388 408 - -
Bva05g00904 862 Pfam Glycosyltransferase family 20 62 549 IPR001830 GO:0003824|GO:0005992
Bva05g00904 862 SUPERFAMILY HAD-like 596 844 IPR036412 -
Bva05g00904 862 CDD GT20_TPS 62 549 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00904 Bva-Chr5 4550396 4553681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00904 1 851 Trehalose Biosynthesis Gene Families AT2G18700 67.251 0.0 1200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00904 K16055 - gmx:100810498 1392.48