Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00900 ATGGCAGTGAAAACAAATATTGCTCTACAGCTTGTGTTGGGGCTTGTCTTCGTAGGCCTTTTCTCGGCCACATCCGCCATTTCTGGAACAGCCACTTACTACAACGTTTACGTTCCATCTGCATGCTATGGGTACCAGGACCAGGGAACGATGATAGCGGCTGCAAGCGATGCATTGTGGGACAATGGAGCTGCATGTGGAAGAATGTACAGTGTGAGATGCACAGGGCCCACCAATCAAGGAGTGCCACAACCTTGCACTGGTAACACCGTCACCGTCAAGATTGTAGATCGTTGTCCTTCCCCGGGATGCCAAGCAACCATTGATCTCTCTCAGCAAGCTTTCTCTGCAATTGCTGACGTTAATGCTGGAAAAATCAACATTGAATACAACCAGGTGTA 401 0.4888 MAVKTNIALQLVLGLVFVGLFSATSAISGTATYYNVYVPSACYGYQDQGTMIAAASDALWDNGAACGRMYSVRCTGPTNQGVPQPCTGNTVTVKIVDRCPSPGCQATIDLSQQAFSAIADVNAGKINIEYNQV 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00900 133 SUPERFAMILY Barwin-like endoglucanases 15 133 IPR036908 -
Bva05g00900 133 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN ISOFORM X2 8 133 - -
Bva05g00900 133 SMART dpbb_1 52 130 IPR007112 -
Bva05g00900 133 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 8 133 IPR044206 GO:0009627|GO:0048046
Bva05g00900 133 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 28 133 IPR007112 -
Bva05g00900 133 Pfam Lytic transglycolase 53 130 IPR009009 -
Bva05g00900 133 Gene3D - 24 133 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00900 Bva-Chr5 4528098 4528892 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00900 16 133 Expansin Gene Family AT2G40610 30.769 3.02e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00900 - - vra:106764512 213.772