Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00890 ATGAGAATGAGAGGATTCGATTACTCCATGCCAGCACTGGCTATATTTGTGCTGCAGTTCACTTATGCAGGTGTTGCTCTTAGCACAAGAGTGGCTTTATTACAGGGAATGAGTCCCAGGGTCTATGTTGTATATAGACAAGCCGTGGCAACTGCTGTTGTTGCACCAGTAGCATATTTCTCTAGCAGAAGGTCTGGTTCCTGTTCGTTAAATTTAAAGagttttactttgattttcttgGCCTCGCTTTTTGGAATTACCATCTGTCAGAATGTCTTTTTCGAGGGTCTATATCTGGCCTCCTCCTCTATTGCAAGTGCAACAAGTAATCTTATTCCAGCAGTCACATTTGTGATAGCAGCTTCTCTAGGACAGGAAAAAGTGAACATTCGAGGCTTAAGAAGTATAGCCAAGATACTGGGGACAGTGATCTGTGTGAGTGGAGCAGTGTCAATGTCATTGGTGAAGGGTCCAAAGCTACTGAATGCAGAGCACTTGCCCTCAAAATCAGTAATGGCTTCAGGAGGTGAGAACTGGTTGCTGGGTTGTTTACTTCTCTTCGCAAGCTGTTGTTTCTGGTCAGCCTGGCTCATTTTGCAGGTCCCGATAACTGCAAGCCATCCTAATCACCTATCTTTGTCAGCTTGGATGTGTTTTATGTCAACATTGCAGTCAGCTGCAGTTACAGTAATTTTAGAGAGAGACCCAGAAGCTTGGAAGATGAAATCAACACTTCAACTTTCTTGCTGTGTATATGCAGGAGTGATAGGATCCGCAGTATCTTATTTTATCCAAGCATGGTGCATTTCAAGGAAAGGTCCTCTCTTCTCTGCAATGTTCAGTCCTCTGTACACTGTAATTGTCACCATATTGGCTGCCTTGTTTCTTAATGAGGAGATATACACTGGAAGCTTGGTAGGGGCAATTGGAGTGATCATGGGCTTGTATGTTGTGCTATGGGGTAAAGCTGCTGATGTTGAGGTGACAAAGGATACAGATCCAATCcagaaaattaatcaaatagaaaCGGAGCAAGTCAAAATCTTGATAGAAGAATCTATGCCAAGAAAGGATGAAGAGTTCTGCAAACGTCATTTGGAGGAACCCCTTCTTCTATCTGCTAAATCACCCTCATCTTTTTA 1142 0.4194 MRMRGFDYSMPALAIFVLQFTYAGVALSTRVALLQGMSPRVYVVYRQAVATAVVAPVAYFSSRRSGSCSLNLKSFTLIFLASLFGITICQNVFFEGLYLASSSIASATSNLIPAVTFVIAASLGQEKVNIRGLRSIAKILGTVICVSGAVSMSLVKGPKLLNAEHLPSKSVMASGGENWLLGCLLLFASCCFWSAWLILQVPITASHPNHLSLSAWMCFMSTLQSAAVTVILERDPEAWKMKSTLQLSCCVYAGVIGSAVSYFIQAWCISRKGPLFSAMFSPLYTVIVTILAALFLNEEIYTGSLVGAIGVIMGLYVVLWGKAADVEVTKDTDPIQKINQIETEQVKILIEESMPRKDEEFCKRHLEEPLLLSAKSPSSF 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00890 380 Pfam EamA-like transporter family 11 150 IPR000620 GO:0016020|GO:0016021
Bva05g00890 380 Pfam EamA-like transporter family 181 319 IPR000620 GO:0016020|GO:0016021
Bva05g00890 380 PANTHER WAT1-RELATED PROTEIN 13 354 IPR030184 GO:0016021|GO:0022857
Bva05g00890 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 322 - -
Bva05g00890 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 147 - -
Bva05g00890 380 PANTHER WAT1-RELATED PROTEIN 13 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00890 Bva-Chr5 4469785 4471532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00890 11 376 Nodulin-like Gene Family AT4G30420 53.763 2.52e-136 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00890 - - mnt:21405797 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00890 05 4469785 4471532 Bva05g00890 05 4469785 4471532 ECH