Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00889 ATGGGAGGGTTCGATTACTACATGCCAGTACTTGCTATGTTTGTGCTACAGTTCATTTATGCAAGTGTTGCTCTCACCACAAGAGTGGCTTTGTTACAGGGAATGAGTCCCAGGGTCTTGGTTGTCTACAGGCAAGCTGTGGCAACTGCTGTTATTGCACCCGTCGTTTATTTCTCATGCAGAAAGTCTGGTTATTGTTCGTTAAATTTAAGGAGTTTTACTTTGATATTCATGGCCTCGCTTGTTGGAATTACAATcaatctgaattttttttacgaGGGTCTGTATCTGGCCAACTCCTCTACTGCAAGTGCAATAACTAATCTTGTTCCAGCAGTCACATTCGCAATAGCAGCATTTACGGGatTGGAGAAAGTGAACATTCGAAGCTTAAGAAGTATAGCTAAGATACTGGGGACAGTAATCTGTGTGATTGGAGCAGTTTCAATGTCATTGCTAAAGGGTCCAAAGCTGCTAAATGTAGAGTACTTTCCCTCAAAATCAGTAATGGGCTCAGGTGATAACTGGTTTCTGGGTTGTCTACTTCTCATTGGAAGCAATTGTTTCTGGTCAATTTGGTACATTTTGCagGTCCCGGCCTCTGCAAGCCATCCCAACTACCTATCTTTGTCAGCTTGGATGTGTTTCATGTCAGCATTGCAGTCAGCAGCGGTTACAGTGATCTTAGAGAGAGACCCAGAAGCTTGGAAGATAAATTCAATACTCCAACTTTCTTGCTGTGTATATGCAGGAGTGATAGGATCCGCAGTATCTTATTTTATCCAAGTATGGTGCATTTCAAGGAGAGGTCCTCTCTTCTCTGCAATGTTCACTCCTCTGTACACAGTAATTGTCACCATATTTGCTGCCTTGTTTCTTAACGAGGAGATATACACCGGAAGCTTGGTAGGGGCAATTGGAGTGATGATGGGCTTGTATGTTGTGCTATGGGGTAAAGCTGCTGATGCTGTGGTGACAGAGAATACAGATCCAAGCCAGCAAATAAATCAGACAGAATCAGAGCAACATAAGATGGGGGGTTTAGAGGGTTACCTTCCTGCACTGGCTATGATTGGGTTGCAATTTCATTATGCAGCTCTTGCCATCTTCACTAGAGCTGCTCTCTTAAATGGAATGGGTGCTAGGGTCTTTGTTGTCTATAGGCAAGCAATAGCCACTCTAGCATTGGCTCCAATAGCATTAAATCCCAAGCGGATAACAGCTAATCAGAACGCATATTTTGAAGGTTTATACTTTGCCTCTTCAACAGTAACTACTGCGATGAGTAATCTGATACCAGCAGTAACCTTTATAATGGCAGCAATTGTTGGAATGGAGAAAGTTGACCTAAGAAGCTTAAGAAGCGTGGCCAAAATAATAGGGACAGTTCTGTGTGTTGGTGGAGCCATAACCATGGCATTGCTCAAAGGAGAAAAGCTGATACACATGGAGTTGATTCCTTTGAAATATGTCATGGGCACTGAAACTGAAAATTGGCTACTGGGTTGCCTATTGCTCCTATTAAGTAGTTTTTGTTGGTCATTTTGGATCATCATGCAGGTACCAGTTTCTTCAAGCTGCCCTGATCATGTAGCTTCGACTTTCTGGATGTGTTTACTAACAATGATACAGTCAGTCATATTTACGCTGCTAGTTGAGCTTGATCTTCAAGCATGGAAACTAAGTTCAACTCTAGAAGTTTTATCTTGTTTATATGCAGGAATTGGAATTGCTGTTAGCTTCTTTATTCAAACATGGTGCATTTCTAAAAGAGGCCCACTCTTCTGTGCAATGTTCAACCCTCTATGTACAGTCATCACAGCCTTGGTAGCTGCAACTTTCATGCATGAAGAGTTATATGCTGGGAGCGTGATAGGGGCTTTTGCAGTGATCGCTGGTTTATACATAGTGCTATGGGGTAAAGGCAACTTAGGCAAGGatatagaagaaaacaaaccaGAGGCAGAATCAAACACACAAAACGGTGATATAAGCTGTAAAATAGATTTGGAAGAACCACTTATATCAGACAAATcagaaagcataaaagaaaatacgaTAAATCCCTG 2069 0.4084 MGGFDYYMPVLAMFVLQFIYASVALTTRVALLQGMSPRVLVVYRQAVATAVIAPVVYFSCRKSGYCSLNLRSFTLIFMASLVGITINLNFFYEGLYLANSSTASAITNLVPAVTFAIAAFTGLEKVNIRSLRSIAKILGTVICVIGAVSMSLLKGPKLLNVEYFPSKSVMGSGDNWFLGCLLLIGSNCFWSIWYILQVPASASHPNYLSLSAWMCFMSALQSAAVTVILERDPEAWKINSILQLSCCVYAGVIGSAVSYFIQVWCISRRGPLFSAMFTPLYTVIVTIFAALFLNEEIYTGSLVGAIGVMMGLYVVLWGKAADAVVTENTDPSQQINQTESEQHKMGGLEGYLPALAMIGLQFHYAALAIFTRAALLNGMGARVFVVYRQAIATLALAPIALNPKRITANQNAYFEGLYFASSTVTTAMSNLIPAVTFIMAAIVGMEKVDLRSLRSVAKIIGTVLCVGGAITMALLKGEKLIHMELIPLKYVMGTETENWLLGCLLLLLSSFCWSFWIIMQVPVSSSCPDHVASTFWMCLLTMIQSVIFTLLVELDLQAWKLSSTLEVLSCLYAGIGIAVSFFIQTWCISKRGPLFCAMFNPLCTVITALVAATFMHEELYAGSVIGAFAVIAGLYIVLWGKGNLGKDIEENKPEAESNTQNGDISCKIDLEEPLISDKSESIKENTINP 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00889 689 Pfam EamA-like transporter family 178 316 IPR000620 GO:0016020|GO:0016021
Bva05g00889 689 Pfam EamA-like transporter family 501 638 IPR000620 GO:0016020|GO:0016021
Bva05g00889 689 Pfam EamA-like transporter family 9 149 IPR000620 GO:0016020|GO:0016021
Bva05g00889 689 PANTHER WAT1-RELATED PROTEIN 406 669 - -
Bva05g00889 689 SUPERFAMILY Multidrug resistance efflux transporter EmrE 556 642 - -
Bva05g00889 689 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 148 - -
Bva05g00889 689 PANTHER WAT1-RELATED PROTEIN 406 669 IPR030184 GO:0016021|GO:0022857
Bva05g00889 689 PANTHER WAT1-RELATED PROTEIN 353 404 IPR030184 GO:0016021|GO:0022857
Bva05g00889 689 PANTHER WAT1-RELATED PROTEIN 11 338 IPR030184 GO:0016021|GO:0022857
Bva05g00889 689 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 319 - -
Bva05g00889 689 PANTHER WAT1-RELATED PROTEIN 353 404 - -
Bva05g00889 689 PANTHER WAT1-RELATED PROTEIN 11 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00889 Bva-Chr5 4464554 4468980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00889 345 684 Nodulin-like Gene Family AT4G30420 44.415 1.79e-103 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00889 - - mnt:21405797 466.848