Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00857 ATGGAAACTAGCCGTGGACTTTTTACGGGGACTACTGATGGCAATGAGCTTGTGGTCATCGAAGGACATGAAGAGCCAAAGCCTGTCAGGAACATAGATGGGCAGCTCTGTGAGATATGTGGTGACAGAGTGGGACTTACAGTTGATGGAGATTTATTCGTGGCTTGTGAAGAGTGTGGTTTCCCAGTGTGCAGGCCATGCTATGAGTATGAGAGGAGGGAAGGGACACAGGTTTGCCCTCAGTGCCAGACAAGATACAAGCGTATCAAAGGAAGCCCAAGAGTGGAGggagatgaagatgaagatgatgtGGACGATATCGAACAAGAATTTAGAATGCTGCAGGGGAAGATAAGCCATGGAGACGACGATGAGAATGCTAAATCACCATTAGATGCAGCAAAGGTGAATGAGGAGCGGCCAATATCTTCTCATGGTCTTGGAGAATCTGGAAGTGCAAGATGGGATGAAAAGGATAAAGACTGGAAATTGAATCAAGGCAATCTGTGGCCTGAAACAGATGCCTCCGTGGACCCCGAAAAGGCCATGAGAGATGAAGCTAGACAGCCACTCTCAAGGAAAGTAGCAATACCATCAGGGAGACTCAGCCCGTATAGAATGATGGTTGTTGCTCGGCTTATCATCACAGTATTATTCATTCTGTATAGAATATCTCACCCAGTGCCTGAAGCAATTGGACTCTGGCTAATATCTGTATCATGTGAAATCTGGCTTGCACTTTCATGGATGCTTGATCAGCTTCCCAAATGGTTTCCCACTGATCGCGAGACATACCTTGATCGGCTTTCAATCAGGTATGAACCAGAGGACAAGCCCAATTTGCTTTTTCCACTTGATGTCTTTGTCACAACTGTGGATCCAATCAAGGAGCCACCTTTGCTTACAGCCAACACAGTTCTTTCAATCTTGGCGATGGACTACCCTGCTGACAGAATCGCATGCTATGTTTCTGATGATGGAGCTTCCATGCTGACCTTTGAAGCTCTTCAAGAAACTGCTGAATTTGCACGAAAGTGGGTCCCATTCTGCAAAAAACATTCTATAGAGCCTCGAGCACCAGAGAAGTACTTCTCCGAGAAGATTGATTTTCTCAAGGATAAGGTCCAGCCAACATATGTAAAAGAACGTCGAACTATGAAGAGAGAATATGAAGAATTTAAGGTTAGAATAAATTCACTGGTGGCTAGATTCACGAGAGTTCCCGTAGATGGGTGGACCATGAAAGATGGGACACCATGGCCAGGAAACAATACCAGAGATCATCCTGGAATGATACAAGTCCTTCTTGCTCAGAGTGGAGGCCCTGAATCTGATGGCGCAGGAAATGAGCTTCCCCGTCTTGTCTATGTGTCTCGCGAGAAAAGGCCCGGATTTCAACACCACAGCCGAGCTGGTGCACTGAATGCCTTGCTTCGCGTATCTGCAGTGCTAAGCAATGCTCCTTTTGTGCTGAATTTGGATTGCAATCATTATGTAAATAATAGCAAGGCTGTGAGAGAGGCCATGTGTTTCTTCATGGACCAGCAAACTGGGAAGAGCATTTGCTTTGTCCAATTCCCAATACGATTCGATAGCCTTGACTCGCATGATCGTTACGCCAACAGGAACACGGTTTTGTTTGatATTAAATTGAGGTGTGAAGATGGAATTCAGGGACCTACTTATGTTGGTTCAGCATGTATCTTCAGAAGGAAAGCTTTATATGGCTGTGATCCTCCTAAGGTTTCAAAGCGCCCGAAAATGGTAGGCTGTGACTGCTGTCCATGTTTTGGAGCCCGTAAGAAGCCACAAGTGCATTCTAAGCATGATCGAAATGGAGATGATGCAAGTATAACAGgAGCAGATGAAGACAAGCAAGAATTAATGTCACacatgaattttgaaaataaatttgggaaGTCTGCAATCTTTGTGAATTCTACCTTAGATGAACAGGGTGGCATTCCTTCATCCTCCAATCTAGCAGCTCTGCTTAAAGAAGCCATTCATGTTATGAGTAGTAGCTATGAGGACAGAACTCCATGGGGAAAGGAGGTAGGTTGGGACTATGGATCTACAGCATCAGATACTCTGACAAGTTTTAAGATGCATTGTCGTGGTTGGAGATCTATATACTGCATGCCAAAGAGATGTCCATTCAGAGGTACGGCTCCTATCAACCTTTCAGATCGACTAAACCAGGTGCTTAGATGGTCAGTGGGATCAATGGAGATCGTTTTCAGCCGCCATTGCCCAATATTGTATGGGTTGAGGGTCGGAAGACTCAAGGGGCTTCAGAGGGTTTCCTATATCAGTAGCACTGTCTATCCCTTCAGCTCAATACCCCTCCTAGTATACTGTCTCCTTCCTGCTGTCTGCTTGCTCACCGGCAAATTCATCACACCATCGATAAGCACTTTTGCTAGCCTCCTCTTCATTGGTTTGTTCATATCAATTTTTGCAACGGGTATTCTTGAGTTGAGATGGAGTGGAGTTACCCTTGAGGAATGGTGGAGAACCGAGCAATTCTGGGTCATCAGCAGTGTTTCTGCGCACCTCTTTGCCATTGTACAAGGCTTTATGAAGGCCCTGACTAAAGCTGATATGAGCTTCATTATCATGACGAAGGCACCAGATGATGGGGAGTTCCGAGAATTGTATGCCTTTAGATGGACTTCCCTCCTAGTACCTCCAACTACCATCATAATCATCAACCTTATTGGTATAGTAGCAGGAATGACAGATGCCATAAACAGCGGTGAACATTCCTGGGGATTACTACTTGGGAAgctcttcttttccttctggGTTATCGTCCATCTTTACCCATTCTTTAAAGGTCTGATGGGGAGGCAGAACCGAACACCAACTCTTGTTATTATATGGTCAGTGCTTTTGGCTTCTATCTTCTCCTTAGTTTGGGTAAGAATTGACCCTTTTgtgttaaaaacaaaaggaccTGACATCATGCAATGTGGAATcagttgttg 2990 0.4371 METSRGLFTGTTDGNELVVIEGHEEPKPVRNIDGQLCEICGDRVGLTVDGDLFVACEECGFPVCRPCYEYERREGTQVCPQCQTRYKRIKGSPRVEGDEDEDDVDDIEQEFRMLQGKISHGDDDENAKSPLDAAKVNEERPISSHGLGESGSARWDEKDKDWKLNQGNLWPETDASVDPEKAMRDEARQPLSRKVAIPSGRLSPYRMMVVARLIITVLFILYRISHPVPEAIGLWLISVSCEIWLALSWMLDQLPKWFPTDRETYLDRLSIRYEPEDKPNLLFPLDVFVTTVDPIKEPPLLTANTVLSILAMDYPADRIACYVSDDGASMLTFEALQETAEFARKWVPFCKKHSIEPRAPEKYFSEKIDFLKDKVQPTYVKERRTMKREYEEFKVRINSLVARFTRVPVDGWTMKDGTPWPGNNTRDHPGMIQVLLAQSGGPESDGAGNELPRLVYVSREKRPGFQHHSRAGALNALLRVSAVLSNAPFVLNLDCNHYVNNSKAVREAMCFFMDQQTGKSICFVQFPIRFDSLDSHDRYANRNTVLFDIKLRCEDGIQGPTYVGSACIFRRKALYGCDPPKVSKRPKMVGCDCCPCFGARKKPQVHSKHDRNGDDASITGADEDKQELMSHMNFENKFGKSAIFVNSTLDEQGGIPSSSNLAALLKEAIHVMSSSYEDRTPWGKEVGWDYGSTASDTLTSFKMHCRGWRSIYCMPKRCPFRGTAPINLSDRLNQVLRWSVGSMEIVFSRHCPILYGLRVGRLKGLQRVSYISSTVYPFSSIPLLVYCLLPAVCLLTGKFITPSISTFASLLFIGLFISIFATGILELRWSGVTLEEWWRTEQFWVISSVSAHLFAIVQGFMKALTKADMSFIIMTKAPDDGEFRELYAFRWTSLLVPPTTIIIINLIGIVAGMTDAINSGEHSWGLLLGKLFFSFWVIVHLYPFFKGLMGRQNRTPTLVIIWSVLLASIFSLVWVRIDPFVLKTKGPDIMQCGISC 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00857 996 SUPERFAMILY Nucleotide-diphospho-sugar transferases 297 806 IPR029044 -
Bva05g00857 996 ProSiteProfiles Zinc finger RING-type profile. 37 83 IPR001841 -
Bva05g00857 996 MobiDBLite consensus disorder prediction 117 139 - -
Bva05g00857 996 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
Bva05g00857 996 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 5 996 - -
Bva05g00857 996 SUPERFAMILY RING/U-box 21 105 - -
Bva05g00857 996 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 19 110 IPR013083 -
Bva05g00857 996 MobiDBLite consensus disorder prediction 151 165 - -
Bva05g00857 996 Pfam Cellulose synthase 285 989 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bva05g00857 996 CDD mRING-HC-C4C4_CesA_plant 35 85 - -
Bva05g00857 996 MobiDBLite consensus disorder prediction 117 187 - -
Bva05g00857 996 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 435 578 IPR029044 -
Bva05g00857 996 PANTHER CELLULOSE SYNTHASE 5 996 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00857 Bva-Chr5 4286213 4291403 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00857 1 996 Cell Wall Biosynthesis AT5G17420 67.184 0.0 1444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00857 K10999 - gmx:100777270 1554.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00857 05 4286213 4291403 Bva05g00857 05 4286213 4291403 ECH