Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00853 ATGCAGCAAAGTGATCAAACAGTGCTGAGCTTGAGACCTGGTGGTGGTCGTGGCAGCGGTAGCGGCAGCAGGTTCATTGGTGCTCGATTCGATTCGTCATCGTCTGCAGCTCCTTCCCCTGCTTTTGGTTCCTTTTCCGCTGATCTTCATCTCTTGCGTCCCCATGGCGGTGCTcctccttctttctctcttaagACTGGAGATTCACGGTTTGAGGGTCGTGAGCGTGTTCAGTACACCAGAGATCAGCTTTTGCAGCTCAGAGAGGCTGTCGAGGTCCCTGATGATATTCTAAAAATCAAGAGAGAGATAGAAGCTGAAATTTTTGGTGAAGAACTAAGCTGGTCTCGTGCGGAAGGAAATcAGCCTCTGCAGCAATTTCAAAATCGATATTCGGAGCCAGATAATCGTGACTGGCGTGGCCGGTCTGGACCAGTTCCTGCTACAGGAGAAGAGAGGTCTTGGGAAAGCCTGCGAGAGAGACAGCAGGATGGTGGTCAGGTTAATCGCCAAGACCAGTTTGCCAGGGCACAGATTTCTTATAATCAAGGGGGAGGACCAGCTCCTACTCTAGTCAAGGCTGAGGTGCCATGGTCAGCTAGAAGGGAAAGTCTGTCGGAGAAGGATCGTGTCTTGAAGACTGTAAAAGGGATATTAAATAAGTTGACTCCTGAGAAGTTTGATCTTCTGAAGGGTCAATTGATCGATTCTGGCATTACATCAGCTGACATCTTAAAGGGGGtaatttcacttatttttgaCAAGGCTGTGTTGGAACCAACATTCTGCCCCATGTATGCTCTTCTGTGTTCTGATCTTAATGAAAAGCTGCCTCCGTTCCCATCTGAAGAACCTGGTGGGAAAGAAATCACTTTTAAGCGGATACTGTTGAATATCTGCCAGGAGGCTTTTGAAGGTGCTGATAAACTTAAGGAAGAAGTGAGGCAGATGACTTCCCCTGAGGAGGAGATGGAGCGTAGGGACAAGGAAAGACTGGTCAAGCTTCGTACTCTTGGAAACATCCGTTTAATTGGTGAGCTATTAAAGCAGAAGATGGTTACTGAAAAGATCGTCCATCACATTGTGCAGGAGCTTTTAGGACCAGCTGATAGCAAGTCCTGTCCAGTAGAGGAAAATGTTGAAGCTATATGTCAGTTTTTCAACACTATTGGTAAGCAGCTCGATGAAAGCCCAAAATCACAGCGTATAAATGATATGTACTTTAGCCAATTGAAGGAATTAAGTGCGAACCCCCAACTTGTGCTACGGTTGAGGTTCATGATTAAAGATGTTCTTGATTTGCGTGCTAATAATTGGGTTCCAAGACGCGAAGAGGTGAAAGCCAAAACCATCACTGAAATTCATTCTGAGGCGGAAAAAAATCTTGGATTACGTCCAGGTGCCACTGCAAGCATTAGAAATACTCGTGGTGTCCTGTCAGGCATTCAAGGAAATGCCAGCCCGGGCTACCCTATGGTTCGTCCAGGTACAGGGGGTTTGATGCCTGGAATGCCAGGTCCCAGGAAGATGCCCGGGATGCCTGGAATTGATAATGACAACTGGGAGATGCCGAGGGCTCGGTGGATGCCAAGAGGAGACGTGGCAGGTGTCCAATCCGGAGGACGTGGCCAGTCTCCTTTACTTGCTAAATCAGGATCAAGTCTGAACTCAAAGTACCTACCTCAAGGTAGTGGTGGCATTATAAGTGGAAGGAACAGTGCACTACTGCATGGAGGTAGCACTCCTTCTGCTCGCCCATCAAACATTGGCGTGGGTTCTGAGCCTGCACCTCAATTCCCTGCACCCACTAAAGCTGTTCCTGCTGTGTCCTCTGAGAAGCCACAAGCTCAAAAGTTGAACCCTGATGATCTTCGTCGCAAATCTGTCTCCCTTCTGGAAGAATATTTCAGTATTCAGATGTTGGATGAGGCATTACAGTGTGTGGAGGAGCTAAATTCTCCAGCCTACTACCCTGAGTTTGTGAAAGAAGCCATTTCCCTTGCATTAGATAAAGGCCCACCTCCCGTTGAGCCCGTTGCCAATCTTCTCAAGTATCTCTTTAACAAGAAGGTTCTTACAGCTAGAGATATAGATACTGGATGTTTGCTATTTACTTGTATGCTGGATGATATCGGCATAGATTTACCTAAGGCACCAAATAATTTTGGTGAGATTATTGGGAAACTAATTTTGGCTAGGATACTGGATTTTAAGGTGGTAAAACAGATACTGACCAAGGTGGAAGATGACCGGTTCCagaaacaaatatttgatGCCGCGGTACAGGTCATTAGTTCTGCATCTGGGCAAGCTGTGTTGGATTCTCAGGCATCTGATGTTGAGGCCTGCCGGAGTCTGTTTAAGTG 2366 0.4611 MQQSDQTVLSLRPGGGRGSGSGSRFIGARFDSSSSAAPSPAFGSFSADLHLLRPHGGAPPSFSLKTGDSRFEGRERVQYTRDQLLQLREAVEVPDDILKIKREIEAEIFGEELSWSRAEGNQPLQQFQNRYSEPDNRDWRGRSGPVPATGEERSWESLRERQQDGGQVNRQDQFARAQISYNQGGGPAPTLVKAEVPWSARRESLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSEEPGGKEITFKRILLNICQEAFEGADKLKEEVRQMTSPEEEMERRDKERLVKLRTLGNIRLIGELLKQKMVTEKIVHHIVQELLGPADSKSCPVEENVEAICQFFNTIGKQLDESPKSQRINDMYFSQLKELSANPQLVLRLRFMIKDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASIRNTRGVLSGIQGNASPGYPMVRPGTGGLMPGMPGPRKMPGMPGIDNDNWEMPRARWMPRGDVAGVQSGGRGQSPLLAKSGSSLNSKYLPQGSGGIISGRNSALLHGGSTPSARPSNIGVGSEPAPQFPAPTKAVPAVSSEKPQAQKLNPDDLRRKSVSLLEEYFSIQMLDEALQCVEELNSPAYYPEFVKEAISLALDKGPPPVEPVANLLKYLFNKKVLTARDIDTGCLLFTCMLDDIGIDLPKAPNNFGEIIGKLILARILDFKVVKQILTKVEDDRFQKQIFDAAVQVISSASGQAVLDSQASDVEACRSLFK 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00853 788 MobiDBLite consensus disorder prediction 1 40 - -
Bva05g00853 788 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 3 787 IPR045208 GO:0003743
Bva05g00853 788 MobiDBLite consensus disorder prediction 570 588 - -
Bva05g00853 788 Gene3D - 616 783 - -
Bva05g00853 788 Pfam MIF4G domain 212 438 IPR003890 GO:0003723|GO:0005515
Bva05g00853 788 MobiDBLite consensus disorder prediction 536 556 - -
Bva05g00853 788 ProSiteProfiles MI domain profile. 623 745 IPR003891 -
Bva05g00853 788 SUPERFAMILY ARM repeat 618 773 IPR016024 -
Bva05g00853 788 MobiDBLite consensus disorder prediction 129 171 - -
Bva05g00853 788 SMART if4_15 212 438 IPR003890 GO:0003723|GO:0005515
Bva05g00853 788 Pfam MA3 domain 624 736 IPR003891 -
Bva05g00853 788 MobiDBLite consensus disorder prediction 570 619 - -
Bva05g00853 788 SUPERFAMILY ARM repeat 205 441 IPR016024 -
Bva05g00853 788 Gene3D - 203 439 - -
Bva05g00853 788 SMART ma3_7 624 736 IPR003891 -
Bva05g00853 788 MobiDBLite consensus disorder prediction 26 40 - -
Bva05g00853 788 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 3 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00853 Bva-Chr5 4263474 4269475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00853 1 786 Eukaryotic Initiation Factors Gene Family AT5G57870 64.286 0.0 961
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00853 K03260 - gmx:100781275 1176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00853 05 4263474 4269475 Bva05g00853 05 4263474 4269475 ECH