Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00850 ATGCCGTCTCGGTGTGAAATCTGCTGCGAGATATTGATCGCCATATTGCTCCCTCCAGTGGGAGTTTGCCTCAGGCATGGTTGCTGCAGTGTTGAATTCCTCATCTGCTTGCTGTTGACTATACTGGGGTATATTCCAGGGATTATTTATGCTCTATATTCTATTATCTTTGTGGATCGTAAACAGTACTTTGATGAATATAGGCGTCCTTTGTATGCATA 221 0.4299 MPSRCEICCEILIAILLPPVGVCLRHGCCSVEFLICLLLTILGYIPGIIYALYSIIFVDRKQYFDEYRRPLYA 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00850 73 PANTHER BNAA03G50460D PROTEIN 1 72 - -
Bva05g00850 73 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 1 72 IPR000612 GO:0016021
Bva05g00850 73 Pfam Proteolipid membrane potential modulator 8 55 IPR000612 GO:0016021
Bva05g00850 73 ProSitePatterns Uncharacterized protein family UPF0057 signature. 12 27 IPR000612 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00850 Bva-Chr5 4256084 4257048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00850 1 72 RCI2 Gene Family AT4G28088 75.000 6.86e-39 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00850 - - twl:120005186 136.346
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00850 05 4256084 4257048 Bva05g00850 05 4256084 4257048 ECH