Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00849 ATGGAGTTCAAGTTCAGAGCTGTGGATGATCGACCACCAGGTCCACCATCGTTTCTATCCCCTTCTTCTACCATCAGCTCCTTCTGCTACCAATCATGGCCAGCTAGTTATTCAAGCTTTGTTCCTTTTACGAACACTGGCCAAATGGGTAATTCAAACTATGAACATGAAGCAATCCTGCGGGAGCTCGAGAAAGAGCAAATTAGACGGGAGATTATTGCTTCTGAGATAGCACGGAGGAGAATGCTCGAAGATGAAGTAAGAAGAGAGCTGATGCTGGAAAGAGAGTCGGCAATGAGAAGGAATATGGGTGAGGAACTCTCGCTCGAAGAGAAAATTGCAATGCGGCTCAGCCAGAGCTTTTCCATCATGCATCCATCAAATAATCTGCCCTTTGAGGAGAGAATGGTATTTCCAGGTTACAGTGCAATGAATATGTCTCCATTGCCACGATTACCCCAAGTTATGGCCCCTGAAATCAAGCCTCCCCCGGAGATCAGCAAGGATAAGTCTATCATTCTGGATAAGCTGGATCCAGATTGTTATGGAGCAAAGCGGAAAGCCTTAGAATCACCTGCAGTTGATGGTAGTGAGCATTCTCCATTTGGTCTGAAGAAAAAACCAAAGGATGATTGGAGTTGTGCTCTGTGTCATGTTTGTGCCACAAGTGAAAAGGGCTTAAATGAACACCTTCAGGGTAGGAAGCACAAGGCCAAGGAAGCAGCGCTTAGAACTCAGAAGATTGGTAAGAGCACCAGCACATCATTGTTGtcaaagaaaagtaagaagTCTTTGAAGCCTGCTGAAACTATTCTTATCACAACTTCAGGGTTGGAATCAAAATCTGATGAGCAGTCACTTCAATCTGAAGTAGCATTGGAAGGTATATCCAAGAAAGTACATGATAAAGATCTAGTGGAAATAACAAGCAAGGAGCAGCTTGTGCAAGTAAAACAAAATGCTGAAGCTTCAAAGAAGCAAAATGCCAAAGGGCTGGgagtaaagaaaacaaatgaattgaagaggaagaagaaagctaaGTTTTGGTGTGAAGTTTGTCAAGTTGGAGTTCCGTCTCAAATTGTGATGGAGAGGCATAAAAATGGGAGAAAACACGAGGCTCGAATGCtgacatttattaaaaacaaggGAAGTATTCCGGTCTCATCTATGGAATCATCAGAAACTATTCCATTGACCAATGACACTGATGCAGTAAATGTTCTGaccaaagaaacaaacaagaatATGGTGGACAATTTTGCTAATTCAGATGAAACATCTGCCTCACTGAACACTGGCCAAAAGGGGAACCTAAATGATGAAATCGAGAAAGAGCAAATTAGACAGGAGATTATTGCTTCTGAGATTGCACAAAGGAGTACACTGGAAGATGAAGTAAGAAGAGAGTCGGCAATGCAAAGAAATCTGGGTGAGGAGCTCTCGCTTGAAAAGCAACTTGCAATGCCGCTCAGCCCCAGCTTTTCCATGATGCATCCATTAAACAATATACCCTTTGAGGAGAGAATGACATTTCCAAGTAACAGTGCAATGAATATGTTTCCATTCCTACAACTACCGCAAGTTATGGCCCTTGATATCAAGCCACCCCTGGAGATCAACAAGGATAGGTTAATCATTCTGGATAAGCCAGACCCAGATCGTTATAGAGCAAAACTGAAAGCCTTAGAAGCACATGCAATTGATGGTAGTGAGCATTCTCCATTTGGtttgaagaaaaaaccaaAGGATGAGTGGAGTTGTGCTCTGTGTCATGTTTGTGCCTCAAGTGAAAAAGTCTTAAATGAACACCTTGGGGGTAAGAAGCACAAGGCCAAGGAAGCAGCTCTTAGAAGTCAGAAGATTGGGTTGGAGGCAAAAGCAGATGATAAAGATTTTGTGGAAATAACTACTGTGGAGAAGGTTGtgcaaaaaaatcaaaatgcaaaagTGCTGGGAGTAAAGAAAACAGTCCGATTGAAGAAGAATAAGCATGTCATGTCTTGGTGTGAAGTTTGTCAAGTTCAAGTTCCGTCTCGAGTTGTGGAGAGGCATAAAAATGGGAGAAAACACAGGGCTCGAATGCTgatatttactaaaattaagGAAAGTGTCCCGGTCTCATCTACAGTGTCATCAGAAACTACTCCATTGACAGAAGGTAGAGGCGCAATAAATGTTCCGACCGTAGAAACAAACATGAAGATATCAGACAACTTTGCTAATTCAGATAAACCACTTGTGTCTCCAGTGGTTGAATGTAGTGGAGGAGAAGCGGCTGAAGAACCATG 2291 0.4042 MEFKFRAVDDRPPGPPSFLSPSSTISSFCYQSWPASYSSFVPFTNTGQMGNSNYEHEAILRELEKEQIRREIIASEIARRRMLEDEVRRELMLERESAMRRNMGEELSLEEKIAMRLSQSFSIMHPSNNLPFEERMVFPGYSAMNMSPLPRLPQVMAPEIKPPPEISKDKSIILDKLDPDCYGAKRKALESPAVDGSEHSPFGLKKKPKDDWSCALCHVCATSEKGLNEHLQGRKHKAKEAALRTQKIGKSTSTSLLSKKSKKSLKPAETILITTSGLESKSDEQSLQSEVALEGISKKVHDKDLVEITSKEQLVQVKQNAEASKKQNAKGLGVKKTNELKRKKKAKFWCEVCQVGVPSQIVMERHKNGRKHEARMLTFIKNKGSIPVSSMESSETIPLTNDTDAVNVLTKETNKNMVDNFANSDETSASLNTGQKGNLNDEIEKEQIRQEIIASEIAQRSTLEDEVRRESAMQRNLGEELSLEKQLAMPLSPSFSMMHPLNNIPFEERMTFPSNSAMNMFPFLQLPQVMALDIKPPLEINKDRLIILDKPDPDRYRAKLKALEAHAIDGSEHSPFGLKKKPKDEWSCALCHVCASSEKVLNEHLGGKKHKAKEAALRSQKIGLEAKADDKDFVEITTVEKVVQKNQNAKVLGVKKTVRLKKNKHVMSWCEVCQVQVPSRVVERHKNGRKHRARMLIFTKIKESVPVSSTVSSETTPLTEGRGAINVPTVETNMKISDNFANSDKPLVSPVVECSGGEAAEEP 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00849 763 Gene3D Classic Zinc Finger 570 616 - -
Bva05g00849 763 Gene3D Classic Zinc Finger 323 377 - -
Bva05g00849 763 SUPERFAMILY beta-beta-alpha zinc fingers 572 618 IPR036236 -
Bva05g00849 763 PANTHER OS06G0651300 PROTEIN 438 715 - -
Bva05g00849 763 PANTHER OS06G0651300 PROTEIN 1 419 - -
Bva05g00849 763 PANTHER OS06G0651300 PROTEIN-RELATED 1 419 - -
Bva05g00849 763 SUPERFAMILY beta-beta-alpha zinc fingers 194 245 IPR036236 -
Bva05g00849 763 SMART ZnF_U1_5 583 617 IPR003604 GO:0003676|GO:0008270
Bva05g00849 763 SMART ZnF_U1_5 345 379 IPR003604 GO:0003676|GO:0008270
Bva05g00849 763 SMART ZnF_U1_5 669 698 IPR003604 GO:0003676|GO:0008270
Bva05g00849 763 SMART ZnF_U1_5 209 243 IPR003604 GO:0003676|GO:0008270
Bva05g00849 763 PANTHER OS06G0651300 PROTEIN-RELATED 438 715 - -
Bva05g00849 763 SMART c2h2final6 348 372 IPR013087 -
Bva05g00849 763 SMART c2h2final6 212 236 IPR013087 -
Bva05g00849 763 SMART c2h2final6 586 610 IPR013087 -
Bva05g00849 763 Gene3D Classic Zinc Finger 204 251 - -
Bva05g00849 763 Pfam Zinc-finger of C2H2 type 348 372 - -
Bva05g00849 763 Pfam Zinc-finger of C2H2 type 586 610 - -
Bva05g00849 763 Pfam Zinc-finger of C2H2 type 212 236 - -
Bva05g00849 763 Pfam Zinc-finger of C2H2 type 669 691 - -
Bva05g00849 763 SUPERFAMILY beta-beta-alpha zinc fingers 342 376 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00849 Bva-Chr5 4250509 4254856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00849 211 376 C2H2 Transcription Factor Family AT5G61190 30.178 9.91e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00849 - - aprc:113874763 286.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00849 05 4250509 4254856 Bva05g00849 05 4250509 4254856 ECH