Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00847 ATGGCTGACGAGAGCTCTGAAGCTCTCCGAGTTGGTAAACCAGAGCTACGGGAGAGAGAAGAAACGGAAGAATCACAATTAGAAGTTGAcgatgaaaatgaagaagatgacCGAGGTGAACAGAAACGAGATAGTGAAGTGCCACTTGGCCAGTCGCAGCAGGTCGAGTTACTGAGTTATAAACCTCCAGGAGAAGCGGAGCCAAGAAATTCTAATTTGGAAACCCTAGCGGTGCCTTCCCCGGCGAACGATCGGCGTGCCGATTTACAGGACAGCTCTTCTACGCAAACGGAAGGCAAAGCCGAAAGTAAGGAGACAGCTAGACCTTCTGATAAGGAAAATATCACAAGAGAAGCAGTCCAGGAAACTCAGACAGAAAATCAACCTCAAGTGTCATCCTGCCCAACATCATTGTCTGAGTTGTCACTGACTTCTGTCACACAATCTTTATCTTCTGCTCCTAGTCCAATTGTACCAGACCAAAGACTGACACCTCTGAAGGTCAATAACGTTGGTGAGCTGGAGAAAAATCCTTCTGGTGGTAAAACCTTATCTGCTGTTTCTGTTGCAAAGACATCTGCATCTGATGGATATAACTGGCGGAAGTATGGTCAGAAACAAGTGAAGAGTCCTACAGGTTCTCGAAGCTATTACAGGTGTACTCATTCAGACTGTTATGCTAAGAAGATTGAATGCTGTGACCATTCAGGTCATGTGGTAGAGATTGTTTATAAAAGTCAACACAGCCATGATCCACCACGGAAGAAGACAAACTCCGCCAGAGAAAGTAAGGTCGCATCATCGAATGGATCTGCTGTGGAAAACAGTGTTCCTGAACATCCCATCAGATTACTCAGTGATTCAAATCCATCCCCTTATTCAAAAGAACTTCCACAAGAAGCACCATTCAGTGctgaaaagaaacaacaaaactCATCTGATCTTGGTGAGAATGGTAAACTTATTTTGAAGGAGGAGCATATTAATGAGCCAGAGCAGAAAAAAAGAACGAAGAAAAGCGACATAGCATACCCGGATTCTCCTGTGAAACCTGGAAAGAAACCGAAGTTTGTTGTGCATGCAGCAGGGGATGTGGGGATATCAGGTGATGGATACCGGTGGCGCAAGTATGGGCAGAAAATGGTGAAGGGGAATCCTCATCCCAGAAACTATTACAGATGCACTTCGGCTGGATGTCCTGTTCGTAAGCACATTGAGACTGCTGTGGATAACACGAATGCCGTTATCATAACATACAAGGGAGTGCACGACCATGACATGCCTGTGCCCAAGAAACGACATGGCCCACCAAGTGCTCCTCTTGTGGCTGCTGCTGCGCCTGCTTCAATGAACAATACGCAGTCCAAGAAAACTGAGTCACAGCAAAACCAAAAATCTCCTACTCAATGGTCAGTAGACGCAGAAGGAGAATTAACAGGGGAAGCCATGGAGCTTGGGGGTGAAAAAGCTATGGAGTCAGCTCGAACACTTCTGAGCATCGGTTTTGAAATTAAGCCTTGTTG 1523 0.4471 MADESSEALRVGKPELREREETEESQLEVDDENEEDDRGEQKRDSEVPLGQSQQVELLSYKPPGEAEPRNSNLETLAVPSPANDRRADLQDSSSTQTEGKAESKETARPSDKENITREAVQETQTENQPQVSSCPTSLSELSLTSVTQSLSSAPSPIVPDQRLTPLKVNNVGELEKNPSGGKTLSAVSVAKTSASDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCYAKKIECCDHSGHVVEIVYKSQHSHDPPRKKTNSARESKVASSNGSAVENSVPEHPIRLLSDSNPSPYSKELPQEAPFSAEKKQQNSSDLGENGKLILKEEHINEPEQKKRTKKSDIAYPDSPVKPGKKPKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNTNAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPASMNNTQSKKTESQQNQKSPTQWSVDAEGELTGEAMELGGEKAMESARTLLSIGFEIKPC 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00847 507 MobiDBLite consensus disorder prediction 120 158 - -
Bva05g00847 507 MobiDBLite consensus disorder prediction 245 261 - -
Bva05g00847 507 ProSiteProfiles WRKY domain profile. 363 428 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva05g00847 507 MobiDBLite consensus disorder prediction 1 161 - -
Bva05g00847 507 MobiDBLite consensus disorder prediction 1 23 - -
Bva05g00847 507 MobiDBLite consensus disorder prediction 319 343 - -
Bva05g00847 507 SMART WRKY_cls 368 427 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva05g00847 507 SMART WRKY_cls 194 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva05g00847 507 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 26 505 IPR044810 GO:0003700
Bva05g00847 507 Gene3D WRKY domain 353 429 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva05g00847 507 Gene3D WRKY domain 181 254 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva05g00847 507 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 26 505 - -
Bva05g00847 507 Pfam WRKY DNA -binding domain 370 425 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva05g00847 507 Pfam WRKY DNA -binding domain 196 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva05g00847 507 ProSiteProfiles WRKY domain profile. 189 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva05g00847 507 SUPERFAMILY WRKY DNA-binding domain 364 428 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva05g00847 507 MobiDBLite consensus disorder prediction 101 119 - -
Bva05g00847 507 MobiDBLite consensus disorder prediction 425 476 - -
Bva05g00847 507 MobiDBLite consensus disorder prediction 447 473 - -
Bva05g00847 507 MobiDBLite consensus disorder prediction 86 100 - -
Bva05g00847 507 SUPERFAMILY WRKY DNA-binding domain 192 253 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva05g00847 507 MobiDBLite consensus disorder prediction 245 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00847 Bva-Chr5 4241422 4245773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00847 110 507 WRKY Transcription Factor Family AT4G30935 53.500 2.12e-131 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva05g00847 WRKY 2.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00847 - - gmx:100782194 614.379