Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00841 ATGTTTGATTGTGGTTACAAGTCACAATACATGGGTggccaaagagaaaaattcgTGAGGTTGGATGATTTGGATTCTAGACTATCTTCATCTTCTGATACTAGAGTTAAAAGAAGTGgatttaatattgaaaaattgagCCATGGTAGCCATGGAAGCAGTACAACCTCTAGGTCCTTCAAAAGAGGAATGAAAAAGGGATCAGAAGGACTAAAGTCAATTGGCCGATCACTTGGATTTGGGGTATCTAGGGCTGTGTTCCCAGAAGACCTGAAAGTGTCAGAGAAGAAGATATTTGATCCTCAAGACAAATTTTTGCTCTCGTGGAATAAACTGTTTGTTATCTCATGCTTTTTGGCTGTGTCCGTGGaccctttgtttttttatctccCTGTCATTGATGAAAAATTAGCATGTCTTGGTATTGACCGGAAATTGGCAATCGTAGTTACCACCCTGAGGACAGTTGTTGATGCTTTTTATCTTATACACATGGCTCTCCAATTCCGTACAGCTTATATTGCTCCATCATCTCGTGTCTTTGGACGGGGAGAACTTGTGATAAATCCAGCACAGATAGCCAAGCGATACTTGCAGCGTTATTTCATCATCGATTTTCTATCTGTGTTACCCTTACCACAGATTATAGTTTGGAGATTTCTTCTGAGGTCAAAAGGTTCAGATGTACTGGCTACAAAGCAAGCTTTGCTGttcattgttttgtttcaGTATATTCCTAGATTTCTCCGGGTAGGTTCATTGACTTCAGAACTTAAGAGAACTGCTGGTGTCTTTGCTGAAACTGCATGGGCTGGTGCTGCATATTATTTGCTATTATTCATGCTTGCTAGCCATATAGTTGGGGCTTTCTGGTACTTGTTGGCTGTTGAACGGAATGACTCATGCTGGCAGAAGGCTTGTAGAGACAATGGttgcaagaaaaatttcttgtaTTGTGGTAACCAGTTCATGGATGGTTATAGTACCTGGCATAGTAATAGCACAAGTATTCTTGCTGAAGCTTGTGATCCAgataattttggaattttctcACAAGCATTGTCATCTGGCATTATATCATCTAAAAAGTTCATCTCTAAATACTGTTACTGCTTATGGTGGGGGCTCCAGAATTTAAgTACACTGGGCCAGGGACTTCAAACCACCACCAATCCTCTCGAGGTTCTCTTTTCAATAGCAATTGCCATATTAGGGCTTATCCTATTTGCGCTTCTGATTGGGAATATGCAGACTTATCTTCAGTCTGTAACCATTAGGCTCGAGGAAATGAGAGTCAAAAGGCGTGATTCAGAACAGTGGATGCATCATAGGTTGCTCCCGCCAGATCTTAGAGAGCGGGTCAGACGTTATGATCAATATAAATGGTTGGCAACACGTGGTGTAGATGAAGAAATGTTGGTTCAGAGTCTACCAAAGGATCTCAGAAGAGATATTAAGCGTCACCTGTGTCTGGCTTTAGTGAGGAGGGTTCCACTATTCAAGAGTATGGATGAGAGATTGCTTGATGCCATTTGTGAGAGGCTGAAACCATGCTTGTGTACAGAGAACACTTACCTTCTTCGGGAAGGAGATCCAGTTGATGAGATGTTCTTCATCATACGCGGTCGCTTTGAGAGTGTTACCACTGATGGTGGAAGGAGTGGGTTCTTTAATCGCGGTTTTCTGAAAGAGACTGACTTCTGTGGAGAGGAGCTTCTAACCTGGGCACTAGATCCCAAATCTGGCTCTAACCTGCCTTCTTCTACTCGAACAGTTAAGGCCTTAACCGAGGTTGAGGCTTTTGCCTTAACTGCTGAAGAGCTAAAATATGTTGCCAGTCAGTTCAGACGCCTTCACAGCAGACAAGTTCAACACACCTTCCGCTTTTACTCACAACAATGGAGGACTTGGGCTGCATGCTTTATCCAAGCAGCATGGCGACGCTACTCTAAAAGGAAGACTTTGGAAGAGCTTCgtcgaaaggaagaacaaGAGGAGTCAGAAGGAACTCATAGCAATGTGGGTGGAGGTTCATACAGCCTTGGCGCCACCTTCTTAGCTTCCAGGTTTGCAGCCAATGCTCTTCGCGGTGTACATCGCAATCGGAATGCTAAGACTGCCAGGGAGTTGATGAAGCTACAGAAACCTCCAGAACCTGACTTTACTGCAGATGATGCAGACTA 2183 0.4123 MFDCGYKSQYMGGQREKFVRLDDLDSRLSSSSDTRVKRSGFNIEKLSHGSHGSSTTSRSFKRGMKKGSEGLKSIGRSLGFGVSRAVFPEDLKVSEKKIFDPQDKFLLSWNKLFVISCFLAVSVDPLFFYLPVIDEKLACLGIDRKLAIVVTTLRTVVDAFYLIHMALQFRTAYIAPSSRVFGRGELVINPAQIAKRYLQRYFIIDFLSVLPLPQIIVWRFLLRSKGSDVLATKQALLFIVLFQYIPRFLRVGSLTSELKRTAGVFAETAWAGAAYYLLLFMLASHIVGAFWYLLAVERNDSCWQKACRDNGCKKNFLYCGNQFMDGYSTWHSNSTSILAEACDPDNFGIFSQALSSGIISSKKFISKYCYCLWWGLQNLSTLGQGLQTTTNPLEVLFSIAIAILGLILFALLIGNMQTYLQSVTIRLEEMRVKRRDSEQWMHHRLLPPDLRERVRRYDQYKWLATRGVDEEMLVQSLPKDLRRDIKRHLCLALVRRVPLFKSMDERLLDAICERLKPCLCTENTYLLREGDPVDEMFFIIRGRFESVTTDGGRSGFFNRGFLKETDFCGEELLTWALDPKSGSNLPSSTRTVKALTEVEAFALTAEELKYVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKTLEELRRKEEQEESEGTHSNVGGGSYSLGATFLASRFAANALRGVHRNRNAKTARELMKLQKPPEPDFTADDAD 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00841 727 MobiDBLite consensus disorder prediction 702 727 - -
Bva05g00841 727 PRINTS EAG/ELK/ERG potassium channel family signature 368 385 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva05g00841 727 PRINTS EAG/ELK/ERG potassium channel family signature 394 405 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva05g00841 727 PRINTS EAG/ELK/ERG potassium channel family signature 412 421 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva05g00841 727 PRINTS EAG/ELK/ERG potassium channel family signature 165 174 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva05g00841 727 PRINTS EAG/ELK/ERG potassium channel family signature 462 469 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva05g00841 727 PRINTS EAG/ELK/ERG potassium channel family signature 282 292 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva05g00841 727 SUPERFAMILY Voltage-gated potassium channels 100 421 - -
Bva05g00841 727 MobiDBLite consensus disorder prediction 46 61 - -
Bva05g00841 727 Pfam Cyclic nucleotide-binding domain 522 611 IPR000595 -
Bva05g00841 727 Gene3D - 114 424 - -
Bva05g00841 727 Gene3D Helix hairpin bin 427 490 - -
Bva05g00841 727 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 12 724 - -
Bva05g00841 727 CDD CAP_ED 499 630 IPR000595 -
Bva05g00841 727 ProSiteProfiles cAMP/cGMP binding motif profile. 499 629 IPR000595 -
Bva05g00841 727 PANTHER NUCLEOTIDE-GATED ION CHANNEL, PUTATIVE-RELATED 12 724 - -
Bva05g00841 727 ProSiteProfiles IQ motif profile. 635 664 IPR000048 GO:0005515
Bva05g00841 727 SUPERFAMILY cAMP-binding domain-like 428 619 IPR018490 -
Bva05g00841 727 MobiDBLite consensus disorder prediction 45 65 - -
Bva05g00841 727 Gene3D Jelly Rolls 497 617 IPR014710 -
Bva05g00841 727 MobiDBLite consensus disorder prediction 701 727 - -
Bva05g00841 727 Pfam Ion transport protein 108 425 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bva05g00841 727 SMART cnmp_10 499 630 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00841 Bva-Chr5 4215912 4222622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00841 1 725 Ion Channels AT2G23980 74.531 0.0 1129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00841 K05391 - gmx:100820202 1203.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00841 05 4215912 4222622 Bva05g00841 05 4215912 4222622 ECH