LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva05g00835	atggcATTGCTAATAAGAAAAGCCGGCCATTCCATCTTGCTGTGCTCTTTAATCTTTTCCTTTGTATCCATTCTTGTCGTTGCTGCTGAGGCTGTGCCAAAAGAGCAGGAGCTGGATCGAATCTCAGTGCTCCCGGGGCAGCCACTCGTCTCATTTTCCCAGTTCTCCGGTTATGTCACGGTCAACGAGCAGCACGGCCGAGCACTCTTCTACTGGTTCGCCGAGGCCATCGCCTCCCCTCGCACTAAACCTCTTGTTCTCTGGCTCAATGGAGGGCCAGGTTGCTCTTCAGTGGCATATGGAGCATCAGAGGAAATTGGGCCATTCCGGATAAATAAAACTGGCTCTTCTCTCTATCTCAACAAATATTCATGGAACAGAGAAGCAAATATCCTCTTTCTTGAATCTCCTGCCGGTGTTGGTTTCTCATACACAAATACGACCTCTGACCTCAAAACATCTGGGGACAAAAGGACAGCTGAGGATGCTCTGGTTTTTCTAATTCGATGGTTGTCAAGGTTTCCACAATATAAATACAGAGAGTTTTACATTGCCGGGGAGAGCTATGCAGGGCATTACATCCCCCAGTTGGCTAAGAAAATCCATGATTACAACAAAGCAAATCCCCGTATCATAAATCTTAAAGGGTTCATTGTGGGAAATGCAGTGACTGATAACTACCATGATGGAATTGGAACCGTAACATATTGGTGGAGCCATTCAATGATATCTGATCAATCATACAAATCTATCCTCAAATACTGTCACTTCAAAGGACGAAAGACTACTAAAAAATGTGACAAAACTCTGCGTTATGCAGTTAATCATGAATTTGGAAACATTGATCAGTACAGTATTTATACCCCGACATGTCTGAGTTCGCAGAATAATACTCTACGCCGTCTCGTACGGTTCAAGAATACAATCTTACATGGGATTTCTGGGTATGATCCGTGTACTGAAAACTATGCagagaaatattataatcttccTCAAGTGCAGAAAGCAATGCATGCGAATGTCACAAACATTCCTCACAAGTGGTCTGCTTGCAGTAATGTGATCTTTAAGAACTGGAATGATTCTGAAGCTTCTGTATTGCATATATACAAGGAGTTAATTGCAGCCGGTTTGAGAATCTGGGTTTTCAGCGGAGACACAGATTCAGTAGTTCCAGTGACTGCAACTAGGTTTTCCCTCAACCATCTGAACCTCACCACCAAAACTCGTTGGTATCCATGGTACTCAGGGAAACAGGTTGGTGGATGGTCAGAAGTTTATGATGGACTAACCTTTGCAACAGTAAGAGGAGCAGGCCATGAAGTGCCATTGTTCCAGCCAAGGCGAGCTTTTATTCTCTTCAAGTCTTTCCTGGCAGCGAAGCAGCTACCAAAATCTTG	1400	0.4336	MALLIRKAGHSILLCSLIFSFVSILVVAAEAVPKEQELDRISVLPGQPLVSFSQFSGYVTVNEQHGRALFYWFAEAIASPRTKPLVLWLNGGPGCSSVAYGASEEIGPFRINKTGSSLYLNKYSWNREANILFLESPAGVGFSYTNTTSDLKTSGDKRTAEDALVFLIRWLSRFPQYKYREFYIAGESYAGHYIPQLAKKIHDYNKANPRIINLKGFIVGNAVTDNYHDGIGTVTYWWSHSMISDQSYKSILKYCHFKGRKTTKKCDKTLRYAVNHEFGNIDQYSIYTPTCLSSQNNTLRRLVRFKNTILHGISGYDPCTENYAEKYYNLPQVQKAMHANVTNIPHKWSACSNVIFKNWNDSEASVLHIYKELIAAGLRIWVFSGDTDSVVPVTATRFSLNHLNLTTKTRWYPWYSGKQVGGWSEVYDGLTFATVRGAGHEVPLFQPRRAFILFKSFLAAKQLPKS	466

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva05g00835	466	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	18	465	IPR001563	GO:0004185\|GO:0006508
	Bva05g00835	466	Gene3D	-	366	459	-	-
	Bva05g00835	466	Gene3D	alpha/beta hydrolase	35	293	IPR029058	-
	Bva05g00835	466	Pfam	Serine carboxypeptidase	46	459	IPR001563	GO:0004185\|GO:0006508
	Bva05g00835	466	ProSitePatterns	Serine carboxypeptidases, histidine active site.	430	447	IPR033124	GO:0004185
	Bva05g00835	466	Gene3D	-	319	357	-	-
	Bva05g00835	466	PANTHER	SERINE CARBOXYPEPTIDASE 24	18	465	-	-
	Bva05g00835	466	ProSitePatterns	Serine carboxypeptidases, serine active site.	184	191	IPR018202	GO:0004185
	Bva05g00835	466	PRINTS	Carboxypeptidase C serine protease (S10) family signature	170	195	IPR001563	GO:0004185\|GO:0006508
	Bva05g00835	466	PRINTS	Carboxypeptidase C serine protease (S10) family signature	430	443	IPR001563	GO:0004185\|GO:0006508
	Bva05g00835	466	PRINTS	Carboxypeptidase C serine protease (S10) family signature	121	133	IPR001563	GO:0004185\|GO:0006508
	Bva05g00835	466	PRINTS	Carboxypeptidase C serine protease (S10) family signature	134	144	IPR001563	GO:0004185\|GO:0006508
	Bva05g00835	466	SUPERFAMILY	alpha/beta-Hydrolases	44	462	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva05g00835	Bva-Chr5	4191439	4195417	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva05g00835	324	463	Calmodulin-binding Proteins	AT2G22960	28.369	1.79e-12	64.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva05g00835	K16297		-	gmx:100785391	807.364