Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00830 ATGGGTTTTGGAGTATTTGGTTGTATTTTGGTTCTGTCACTCTTCTTCAAGCATTTGGCTTCTCAGCAACCAAATACTGATGGGTTTTTTGCGGCCGACTTTTTGAAGAACATGGGTTTAACATCTTCCGAGGTCAACTTCTCTGCTTCTGTTTGTTCATGGCATCATTGGGTTTCTTGTGATGCCAAGGGAGAGAAAGTGGTTGAGCTGATGGCTTCTGGTTTGGGCCTCTCTGGTGCTATTCCTGAGAACACCATAGGCAAGCTCAGCGAGCTTCAAAGTTTGGATCTTAGCAACAACAAAATCACTAGCTTGCCTCCAGATTTCTGGAGTTTAGGCTCGCTGAAAAGGCTTAACCTTTCTTCCAATCAGATTTCTGGGTCACTGACAAACATTGGTAATTTGGGTCAGCTGGAAGCCCTTGACTTGTCCAGCAACAATTTCTCTGGGGAAATCCCTGAAGCTATAAGCTCACTTAGCAAGCTGCAGGTCCTCAAACTCGCTGAGAATATGTTTGAACATAACATACATTCAGGGATTCTTCAGTGTCAGTCTCTAGTTTCAATCGATCTTTCATCAAATCGGTTAAATGGGTCTCTCCCtggtggttttggttttgggtcTCTCCCTGCGTTCCCTAAGCTGAAGAGCTTGAACCTTGCAGGGAATAATATTTATGGTCGTGAATCAGATTTTTCAGGACTGAAATCCCTTACCAGTCTAAATATATCCGGGAATTCGTTTCAGGGTTCTGTCATGGGTGTGTTTCAGGAAAAGTTGGAGGTTATTGACCTTAGCAGGAACAAATTTCAAGGCCACATTTCTCAGGTACAGTTAAACTTCAGTTACAATTGGTCTCGTTTGGTTTATCTAGATTTATCCGAGAATCAGTTTAGTGGGGAATTTTTCCCAAATTTGAATCAAGCCCAGAATCTGAAACATCTTAATCTTGCACACAATAGATTTACCAGACAGAAGTTCCCACAGGTTGGAATGCTCTTAGGATTGGAATATCTGAATTTGTCTAAAACTAGCCTTGTTGGTCAAATTCCTGCTGAAATCTCACAATTAGGTAATTTGAATACAATTGATCTTTCTATGAACCATCTAGTTGGGGAAGTTCCATCACTAAGGAACGAAAGTCTCCAAATTCTTGACGTTTCAAACAACAATTTGAGTGGAGAAATCCCTCTATCCATCTTAGACAGAATCCCACAAATGGAGAAATACAACTTTTCTTACAATAACTTTACTTTCTGTTCTTCGGAATTTTCCTCTGAGATCCGTCAAACATCATTCTTTGGATCAGTAAACAGCTGCCCAATTGCTGCCAATCCCattcttttcagaaaaagaTCCACCAAACATAATACAATGAAGCTTGCTCTGGCATTGACCTTCTCCATGATCTGCCTGCTTGCTGGGCTTTTATTCCTAGCATTTGGTTGCCgaaggaaaaccaaaatgtgGACAGTAAAGCAAACTTCATACAAAGAAGAACAGAATCTTTCAGGTCCCTTCTCATTCCAGACTGATTCAACTGCCTGGGTAGCTGATGTTAAGCAAGCAACATCAGTCCAAGTAGTAATCTTTGAGAAGCCGTTGCTGAATATTACATTTGCAGACCTCTTGGCTgcaacttcaaattttgatagGGGTACCCTTTTGGCTGAAGGTAAATTTGGGCCTGTTTATAGAGGCTTCTTACCTGGTGGTATTCATGTGGCAGTTAAGGTTTTAGTTGTTGGGTCTACATTGACAGATCAAGAAGCTGCAAGAGAGCTTGAGTATCTTGGTCAAATCAAGCACCCAAGTCTTGTTCCTTTAACCGGATATTGCATAGCAGGAGATCAGAGGATTGCCATATATGACTACATGGAGAATGGGAACTTGCAGAATTTGCTTTGTGACTTGCCTCTTGGGCTGCAGAGGACAGATGATTGGAGCACAGACACTTGGGAAGAAGGTGGCAATAATGGGATTCAAAACGATAGCTCCGAGGGATTACTAACAACTTGGAGATTTCGCCACAAGATTGCGCTTGGCACTGCCCGAGCATTGGCATTTCTGCATCATGGCTGCTCACCTCCAATTATTCATAGGGATGTCAAAGCAAGTAGTGTTTACTTGGATTATAACCTAGAGCCAAGGTTGTCTGATTTTGGGTTGGCCAAGATTTTTGGAAATGGCTTGGATGAGGAGATTGCTCGCGGTTCACCAGGTTATGTCCCACCAGAGTTTTCTCAATCAGAATATGATTCTCCAACACCAAAATCTGATGTATATTGTTTTGGAGTTGTACTCTTTGAGCTAATAACTGGAAAAAAGCCTGCCGGGGATGATTATCCCgatgagaaagaagaaaacttggtaagttgggtCAGAGGACTGGTAAGAAAGAACCAAGCTTCAAGAGCCATTGATCCCAAAATTCGCAACACGGGACCAAAACATCAAATGGAAGAGGCCCTTAAGATTGGATATCTGTGCACAGCCGACCTGCCCTCCAAGCGCCCAAGCATGCAGCAGATAGTTGGTCTCCTTAAGGATATTGAACCTACTGCTaatttgtg 2573 0.4069 MGFGVFGCILVLSLFFKHLASQQPNTDGFFAADFLKNMGLTSSEVNFSASVCSWHHWVSCDAKGEKVVELMASGLGLSGAIPENTIGKLSELQSLDLSNNKITSLPPDFWSLGSLKRLNLSSNQISGSLTNIGNLGQLEALDLSSNNFSGEIPEAISSLSKLQVLKLAENMFEHNIHSGILQCQSLVSIDLSSNRLNGSLPGGFGFGSLPAFPKLKSLNLAGNNIYGRESDFSGLKSLTSLNISGNSFQGSVMGVFQEKLEVIDLSRNKFQGHISQVQLNFSYNWSRLVYLDLSENQFSGEFFPNLNQAQNLKHLNLAHNRFTRQKFPQVGMLLGLEYLNLSKTSLVGQIPAEISQLGNLNTIDLSMNHLVGEVPSLRNESLQILDVSNNNLSGEIPLSILDRIPQMEKYNFSYNNFTFCSSEFSSEIRQTSFFGSVNSCPIAANPILFRKRSTKHNTMKLALALTFSMICLLAGLLFLAFGCRRKTKMWTVKQTSYKEEQNLSGPFSFQTDSTAWVADVKQATSVQVVIFEKPLLNITFADLLAATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVVGSTLTDQEAARELEYLGQIKHPSLVPLTGYCIAGDQRIAIYDYMENGNLQNLLCDLPLGLQRTDDWSTDTWEEGGNNGIQNDSSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDVKASSVYLDYNLEPRLSDFGLAKIFGNGLDEEIARGSPGYVPPEFSQSEYDSPTPKSDVYCFGVVLFELITGKKPAGDDYPDEKEENLVSWVRGLVRKNQASRAIDPKIRNTGPKHQMEEALKIGYLCTADLPSKRPSMQQIVGLLKDIEPTANL 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00830 857 Gene3D Phosphorylase Kinase; domain 1 510 625 - -
Bva05g00830 857 PRINTS Leucine-rich repeat signature 92 105 - -
Bva05g00830 857 PRINTS Leucine-rich repeat signature 135 148 - -
Bva05g00830 857 Gene3D Ribonuclease Inhibitor 30 176 IPR032675 -
Bva05g00830 857 Gene3D Ribonuclease Inhibitor 283 440 IPR032675 -
Bva05g00830 857 Gene3D Ribonuclease Inhibitor 177 282 IPR032675 -
Bva05g00830 857 ProSiteProfiles Protein kinase domain profile. 550 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00830 857 ProSiteProfiles Leucine-rich repeat profile. 91 112 IPR001611 GO:0005515
Bva05g00830 857 ProSiteProfiles Leucine-rich repeat profile. 114 136 IPR001611 GO:0005515
Bva05g00830 857 Gene3D Transferase(Phosphotransferase) domain 1 658 856 - -
Bva05g00830 857 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 853 - -
Bva05g00830 857 SUPERFAMILY L domain-like 210 419 - -
Bva05g00830 857 SUPERFAMILY Protein kinase-like (PK-like) 536 849 IPR011009 -
Bva05g00830 857 SMART LRR_typ_2 112 135 IPR003591 -
Bva05g00830 857 SMART LRR_typ_2 235 258 IPR003591 -
Bva05g00830 857 SMART LRR_typ_2 89 111 IPR003591 -
Bva05g00830 857 SMART LRR_typ_2 159 183 IPR003591 -
Bva05g00830 857 SMART LRR_typ_2 212 234 IPR003591 -
Bva05g00830 857 Pfam Leucine rich repeat 137 196 IPR001611 GO:0005515
Bva05g00830 857 Pfam Leucine rich repeat 81 125 IPR001611 GO:0005515
Bva05g00830 857 Pfam Protein tyrosine and serine/threonine kinase 554 847 IPR001245 GO:0004672|GO:0006468
Bva05g00830 857 SUPERFAMILY L domain-like 39 276 - -
Bva05g00830 857 PANTHER CONCANAVALIN A-LIKE LECTIN/GLUCANASE DOMAIN-CONTAINING PROTEIN-RELATED 1 853 - -
Bva05g00830 857 Pfam Leucine Rich repeat 379 395 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00830 Bva-Chr5 4173748 4177156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00830 69 851 Receptor kinase-like Gene Family AT5G07280 32.653 2.71e-111 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Bva05g00830 PK_Tyr_Ser-Thr 3.8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00830 - - gmx:100797738 1331.24