Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00826 ATGCACCGCAAATTGTTCTTTCGGAAGCCACCCGACGGGCTCCTTGAGATCTGTGAGAGAGTTTATGTTTTTGATTGCTGTTTCACAACTGATGCTTGGAAAGAGGAAAATTATAAACCCTACGTAGATGGGATAATTGGTCAATTTCGAGAGACCACTCCCGATGCTTCCATTATGGTCTTCAATTTCCGTGAGGAAGAAACAGCGAGTCAGATGGCCAACACCTTGTGTGAGAATGGAATTACGATTGTGGACTACCCTCGGCACTATGAGGGTTGCCCGGTGCTCAAAATGGAGCTCATCCACCATTTTTTAAGATCAGGTGAAAGTTGGCTCTCACTTGGGCAGCATAATATGCTGTTAATGCATTGTGAACGTGGTGGTTGGCCGGTTTTATCCTTTATGCTTGCTGCCCTATTGATTTATAGGAAACAATATACTGGGGAGCGGAGGACGTTGGATATGGTTTACATGCAGGCTCCGCAGGAACTTCTGCATTTGTTGACGCCATTAAATCCTATACCTTCCCAGAAGAGGTATCTTCAGTATGTTTCGAGGAGGAATGTGACCTTAGATTGGCCTCCACTGGACAGGGCACTCACATTGGACTGCATCATTCTCAGATTTTTTCCAAACTTTGATGGGGAAGGTGGTTGTCGTCCAATATTTCGAATTTATGGAATGGATCCTCTTGATGCAGGTAAACCACCAAAAGTCTTGTACTCAACaccaaagaaaagcaaagcTGTCAGAGCCTACAAGCAGGCAGAGTgtgaactaattaaaattgatatcaattGCCACATCCAAGGTGACATTGTGATTGAGAGCATTAACTTGAATGGTGACCTGGAGAATGAACAAATGATATTCCGAGTAATGTTCAATACAGCTTTTATTAGGTCTAATATACTGATGCTAAACCGGGATGAAATAGACATTTTATGGGATGCTAAAGATCACTTCCCAAAAGATTTCAGAGCAGAGATCCTTTTCTCGGAGATGAATGCAGCTGCTGCTGTTATTGCGGACGATACCTCTTGCTTTGAAGAGAAGGAGGGACTGCCTGTGGAAGCATTTGCCAGGGTTCAAGAGATATTTAACAATGTGGACTGGTTGAACCCTAGGCCAGATGTTGCATTAAATTTACTCCAACATATAAGTGCATCAACTACCAAGAATGACAAGCTGGATACAAGTTCTGATCCGCATGTCGAGACTAGCATTTTATTGCCTAAAACAAGTACTAAAACGCTTCAAGGGAAAAAGAATGAAGCAAGTTTGGAAAAACGATCTGTATCGTCAATAAGGCAATCTCCAGATAAAAAAGGGGATGAGTCTGTCAAGATTGATGCTACTCCAGAACTACCTGGTAGATCTGATGTCAGCGGGCAAGAGAAGCCTACTTCCTCTGAGAAAAAATCCAGTGAACCTGACCTTTCCTCATCTGGCTCCGTGGATACCTCTAGTGTTTCGCTTTCTCCAAGGACACCTTCTCCACGGCCTTCATTGAGTAGGACTTCGAAACAAACTCTTGATTCTCCTTCCCACATGTTTCCACCTCCTTATCATTTTTCCCCTTTCAAACCAAAATATCTTGTtagtgaagaaaatgaagccCAGTCAGAGGGAAAAAGTCAATCAAGTACCTtgccaaataaattttcaacgGATTCTGCCTCCTGTCCTTCAGATTCAAAAACTTCGACTCAGCAACCTTCTTCACCCCCTGTGCCTCCTCCCTCAACACCCCCTTTAAAGAAGATTCCACCTGTTAGAACTGGATCTGTTTCATCCTCTCCACAACCTCCAACCCCACCTACTCCCCCAACTCCTCCTCTAAAGGAGCATAAGACGATTAGAGCTGAACCTcctccacctccacctcctcctcctccaaaGGTGGAACCACATGGTAGAGATACAGACTCTCCGTCCCCACAACCTCCTCTGAAGGAGGAGCAACATGTTAGAGATAGACTCCCTCCACCCAAATCCTTTCCTCTGAAGGAGGGGCAAGATCTTAGAGCTGGACAACTGCTTCCCTACCCAGCTCCTGTGAAGGAGGAGCAAAATGTTAGAGCTGTTCCCTTGCCTACCATACCATCTTCTCTGAAGGTGGAGCCACATGTTATAGTTGTACCTCCTCCTCCACCCCCACATCCCCTAAAGGAAGGGAACTCTGATAGAGCAGGACCACCTCCACCCTCACCCCCTCCTCATCTTTCTGTGAAAGCTGCAAGTCCTACTACATTGCCGCCGCCTCCACCGCCACCTCCTGCTGCAGCAGCTTCCTCGAAGCACCCTAATCCTTCATTGGAGAATTCATTGAGTGCTTCTTCAGCTCCAGCTGCTCCCCCACCTCCAATTCCCCCTGGCACGACTGGATCTCGATCTAGCTCGCCGGCTGGGTCAAAGGGGCGAACTCTAAATTCAAAGAACcaccaaaccaaaaaattgAAGCCATTACATTGGTTGAAGTTACCCAGAGTAGTGTCAGGAAGTTTGTGGGCTGAGGCACAGAAATCTGGTGAAGATTCcaaAGCCCCGGAGATTGATATGTCAGAGCTTGAGAGTCTCTTCTCAGCAGCAGTCCCAAGTTCAGGCCCtgcaaagaaatcaaacatcCAGAGTTCTGTTGGGccaaaatttgataaagtgCAACTGATTGAGCACAGGCGAGCATATAATTGTGAAATTATGCTTTCAAAAGTAAAGGTTCCATTGCATGACTTAATGAGCTCAGTGTTAGAATTGGAAGAGTCAGCATTAGACATCGATCAGGTTGAGAACCTCATAAAGTTTTGTCCCACGAAAGAGGAGATGGAACTACTCAAGGGTTACACTGGAGAAAAGGAGAAGTTAGGGAGATGTGAACAGttCTTCCTGGAGTTAATGAAAGTACCACGGGTAGAAAGCAAGCTGAGAGTTTTCTCGTTCAAGATTCAGTTCCACTCTCAGGTCTCTGACATTAGAAAAAGCCTGAATATTGTAAATGCTTCTGCGGAAGAGTTTAGGAACTCTGTCAAATTGAGGAGAATTATGCAAACGATACTTTCTCTGGGAAATGCTTTGAACCAAGGAACTGCCAGGGgtTCTGCTATTGGGTTCAGATTGGATAGCCTTCTTAAACTCACTGAGACACGTGCGCGGAATAACAAGATGACTCTCATGCATTACCTTTGTAAGGTACTGGCTGACAAACTACCGGAAGTTCTAGACTTCTCCAAGGATATTGCTAATCTAGAGCCTGCGGCAAAGATCCAACTGAAGTTTCTCGCAGAGGAGATGCAAGCTATAagcaaaggattagagaaAGTAGTACAGGAACTATCAACCTCTGAAAATGATGGTCCTATTTCAGAAACTTTCCGCAAGaATTTGAAAGAGTTCCTCTGTACTTCGGAAGCTGAAGTCCGAGCATTGGCTTCACTATATTCTTCCGCAGGTAGGAATGTGGATGCGttgattctttattttggtGAAGATCCTTGTCGCTGCACGTTTGAGCAAGTTATGTCAACTTTGCTCAACTTCACGAGAATGTTCAACAAAGCCCATGAAGAAAATAGCAAGCAACTTGAACTTGAGATGAAGAAAACATCAGAAAGTGAGAAGAAGATACGCGAATCAGAACGAGTATTGCCTACTGTAATCCGGACTGGCAATGCCAATTG 3677 0.4281 MHRKLFFRKPPDGLLEICERVYVFDCCFTTDAWKEENYKPYVDGIIGQFRETTPDASIMVFNFREEETASQMANTLCENGITIVDYPRHYEGCPVLKMELIHHFLRSGESWLSLGQHNMLLMHCERGGWPVLSFMLAALLIYRKQYTGERRTLDMVYMQAPQELLHLLTPLNPIPSQKRYLQYVSRRNVTLDWPPLDRALTLDCIILRFFPNFDGEGGCRPIFRIYGMDPLDAGKPPKVLYSTPKKSKAVRAYKQAECELIKIDINCHIQGDIVIESINLNGDLENEQMIFRVMFNTAFIRSNILMLNRDEIDILWDAKDHFPKDFRAEILFSEMNAAAAVIADDTSCFEEKEGLPVEAFARVQEIFNNVDWLNPRPDVALNLLQHISASTTKNDKLDTSSDPHVETSILLPKTSTKTLQGKKNEASLEKRSVSSIRQSPDKKGDESVKIDATPELPGRSDVSGQEKPTSSEKKSSEPDLSSSGSVDTSSVSLSPRTPSPRPSLSRTSKQTLDSPSHMFPPPYHFSPFKPKYLVSEENEAQSEGKSQSSTLPNKFSTDSASCPSDSKTSTQQPSSPPVPPPSTPPLKKIPPVRTGSVSSSPQPPTPPTPPTPPLKEHKTIRAEPPPPPPPPPPKVEPHGRDTDSPSPQPPLKEEQHVRDRLPPPKSFPLKEGQDLRAGQLLPYPAPVKEEQNVRAVPLPTIPSSLKVEPHVIVVPPPPPPHPLKEGNSDRAGPPPPSPPPHLSVKAASPTTLPPPPPPPPAAAASSKHPNPSLENSLSASSAPAAPPPPIPPGTTGSRSSSPAGSKGRTLNSKNHQTKKLKPLHWLKLPRVVSGSLWAEAQKSGEDSKAPEIDMSELESLFSAAVPSSGPAKKSNIQSSVGPKFDKVQLIEHRRAYNCEIMLSKVKVPLHDLMSSVLELEESALDIDQVENLIKFCPTKEEMELLKGYTGEKEKLGRCEQFFLELMKVPRVESKLRVFSFKIQFHSQVSDIRKSLNIVNASAEEFRNSVKLRRIMQTILSLGNALNQGTARGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKVLADKLPEVLDFSKDIANLEPAAKIQLKFLAEEMQAISKGLEKVVQELSTSENDGPISETFRKNLKEFLCTSEAEVRALASLYSSAGRNVDALILYFGEDPCRCTFEQVMSTLLNFTRMFNKAHEENSKQLELEMKKTSESEKKIRESERVLPTVIRTGNAN 1225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00826 1225 MobiDBLite consensus disorder prediction 423 452 - -
Bva05g00826 1225 SMART PTEN_C2_2 195 334 IPR014020 -
Bva05g00826 1225 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 10 185 IPR029021 -
Bva05g00826 1225 ProSiteProfiles C2 tensin-type domain profile. 197 335 IPR014020 -
Bva05g00826 1225 PANTHER FORMIN-J 2 665 - -
Bva05g00826 1225 PANTHER FORMIN-J 698 1207 - -
Bva05g00826 1225 Pfam C2 domain of PTEN tumour-suppressor protein 198 334 IPR014020 -
Bva05g00826 1225 MobiDBLite consensus disorder prediction 393 823 - -
Bva05g00826 1225 Gene3D - 194 337 - -
Bva05g00826 1225 Gene3D Protein tyrosine phosphatase superfamily 12 189 IPR029021 -
Bva05g00826 1225 Coils Coil 1184 1204 - -
Bva05g00826 1225 MobiDBLite consensus disorder prediction 539 572 - -
Bva05g00826 1225 Pfam Formin Homology 2 Domain 813 1183 IPR015425 -
Bva05g00826 1225 MobiDBLite consensus disorder prediction 1197 1214 - -
Bva05g00826 1225 SMART it6_source 810 1225 IPR015425 -
Bva05g00826 1225 MobiDBLite consensus disorder prediction 573 588 - -
Bva05g00826 1225 MobiDBLite consensus disorder prediction 403 422 - -
Bva05g00826 1225 MobiDBLite consensus disorder prediction 600 614 - -
Bva05g00826 1225 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 199 335 IPR035892 -
Bva05g00826 1225 MobiDBLite consensus disorder prediction 1197 1225 - -
Bva05g00826 1225 ProSiteProfiles Formin homology-2 (FH2) domain profile. 810 1209 IPR015425 -
Bva05g00826 1225 MobiDBLite consensus disorder prediction 711 765 - -
Bva05g00826 1225 MobiDBLite consensus disorder prediction 796 811 - -
Bva05g00826 1225 Gene3D Formin, FH2 domain 807 1194 IPR042201 -
Bva05g00826 1225 MobiDBLite consensus disorder prediction 475 515 - -
Bva05g00826 1225 SUPERFAMILY Formin homology 2 domain (FH2 domain) 715 1200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00826 Bva-Chr5 4148015 4157155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00826 781 1207 Protein tyrosine phosphatase (PTP) family AT5G58160 72.727 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00826 - - gmx:100786096 1486.09