Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00824 ATGAGTGACAACGGCAGTGAAATTAGTTCCACTTTGCTCCATGGGAAATACGAGCTCGGTCGCCTTCTGGGTCATGGCACTTTTGCCAAGGTCTATCACGCCAGGAATTTCCAGACAGGGAAAAGTGTGGCCATGAAGGTAGTGGGCAAAGAGAAAGTCATCAAGGTGGGCATGATGGAGCAgaccaaaagagaaatttctgtgatgaagatgatgaagcaCCCAAACATCGTTCAGCTCCATGAAGTTATGGCCAGCAAATCGAAGATCTATATTGCCATGGAGCTCGTTCGAGGGGGCGAGCTCTTCAACAAGATTGCTAAAGGTCGATTGAGAGAAGATGTCGCCAGATTCTACTTCCAGCAATTGATTTCCGCCGTTGATTTTTGCCACAGCCGCGGCGTTTACCACCGTGACCTCAAGCCGGAGAATTTGCTTCTGGGAGAAGATGGCAACTTGAAAGTTACTGACTTTGGGCTCAGTACCTTCTCTGAGCACTTGAGGAAAGATGGGTTGTTGCATACAACGTGTGGAACTCCGGCGTATGTCGCGCCGGAGGTAATTGGGAAGAAAGGCTACGATGGTGCCAAGGCTGATATCTGGTCTTGTGGGGTCATCCTCTATGTGCTTCTTGCTGGGTTCTTACCCTTCCAAGATGACAACTTGGTAGCTctgtacaaaaaaatttacaggGCTGACTTCAAATGCCCGCCTTGGTTCTCCCCAGAAGCTCGCAGACTCATCAGCAAGCTTCTCGACCCGAACCCAAATACCCGAATCACGATTTCCAAGATTATGGAATCGTCCTGGTTCAGGAAATCAGTTCCCAGGAGCATGAGGACGAAAGCAGAGCAAAAATTCGAATTCGATTTGGAGGATAATTGCGATAAATCGAAGGAGCAGCCAACGACGATGAATGCGTTCCACATTATATCATTATCTCAGGGGTTCGATTTGTCTCCCTTGTTCgaggagaagaagagggaAGAGAAGGAGGAGCTGAGATTCGCGACGACGAGGCCAGCGAGCAGTGTGATATCGAAGCTGGAGGAGGTGGCCAAGGCCGGGAAGTTCACCGTGAAGAAGAGCGACACCAAGGTGAGGCTGCAAGGTCAGCAATGCGGACGGAAGGGGAAACTGGCAATTGCGGCGGATTTATACGCCGTAACGCCGTCGTTTCTAGTTGTAGAGGTGAAGAAGGACAACGGTGATACCTTAGAGTACAACCAATTCTGCAGCAAAGAACTCCGTCCTGCACTCAAAGACATCCTTTGGACGTCGCCGGCCGAGAATCCGACGCCTGCTTG 1307 0.4767 MSDNGSEISSTLLHGKYELGRLLGHGTFAKVYHARNFQTGKSVAMKVVGKEKVIKVGMMEQTKREISVMKMMKHPNIVQLHEVMASKSKIYIAMELVRGGELFNKIAKGRLREDVARFYFQQLISAVDFCHSRGVYHRDLKPENLLLGEDGNLKVTDFGLSTFSEHLRKDGLLHTTCGTPAYVAPEVIGKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNLVALYKKIYRADFKCPPWFSPEARRLISKLLDPNPNTRITISKIMESSWFRKSVPRSMRTKAEQKFEFDLEDNCDKSKEQPTTMNAFHIISLSQGFDLSPLFEEKKREEKEELRFATTRPASSVISKLEEVAKAGKFTVKKSDTKVRLQGQQCGRKGKLAIAADLYAVTPSFLVVEVKKDNGDTLEYNQFCSKELRPALKDILWTSPAENPTPA 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00824 435 Gene3D Transferase(Phosphotransferase) domain 1 99 277 - -
Bva05g00824 435 PANTHER - 9 433 - -
Bva05g00824 435 SUPERFAMILY Protein kinase-like (PK-like) 14 286 IPR011009 -
Bva05g00824 435 Pfam Protein kinase domain 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00824 435 ProSiteProfiles NAF domain profile. 300 324 IPR018451 GO:0007165
Bva05g00824 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Bva05g00824 435 CDD STKc_SnRK3 16 270 - -
Bva05g00824 435 CDD CIPK_C 306 421 - -
Bva05g00824 435 Gene3D Phosphorylase Kinase; domain 1 14 98 - -
Bva05g00824 435 ProSiteProfiles Protein kinase domain profile. 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00824 435 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 9 433 - -
Bva05g00824 435 Gene3D Kinase associated domain 1, KA1 299 426 - -
Bva05g00824 435 ProSitePatterns Protein kinases ATP-binding region signature. 23 50 IPR017441 GO:0005524
Bva05g00824 435 Pfam NAF domain 302 362 IPR004041 GO:0007165
Bva05g00824 435 SMART serkin_6 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00824 Bva-Chr5 4134044 4136096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00824 2 435 CBL-interacting serine-threonine protein kinases AT4G30960 75.799 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bva05g00824 Pkinase 1.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00824 - K07198 zju:107426850 737.643