Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva05g00812 | ATGCCTCTCAGAAAACCTCCAATCCCTCGTCTCCTCCTCAACAACGTTTCCTGCATGAGAAATGCCCAACAAATTCTACGTCATGTGAATGTGTCTCTTCATGATGGTGGGGCGCTTGTGCTCACGGGCACAAATGGCTCAGGAAAGACAACATTTCTACGCATGTTAGCTGGATTTTCTCGCCCCTCTGCTGGTGAAATTCTTTGGAATGGTCATGACATTACGCAATCAGGAATCTTTCATCAGTATAAGCTTCAGCTCAACTGGCTTTCCCTCAAGGATGCTGTCAAAGAGAAGTTTACTGTTCTCGACAATGTCCAATGGTTTGAAGTTCTTGAAGGCAAGCAGGGAAGGTCTTTGCCTGCACTTGAATTTATGGGCCTAGGAAGATTGGCAAATGAGAAGGCGAGGATGCTGTCCATGGGCCAGCGGAAAAGATTGCAACTTGCCAGGTTGCTGGCAATTGATCGTCCAATTTGGTTGCTAGATGAGCCTTCAGTTGCATTAGACGATGAAGGAGTGAAATTACTTGAATATATTATTGCAGAACACAGAAAGAAAGGTGGGATTGTGATTGTGGCAACTCATTTAACAATTGACATTGAAGATGCCATGATCTTGAGGCTGCCACCAAGGTTTCCAAGGAGGATGACTTTAGTGGATATGCTCGATCGTTCAGACATTTA | 686 | 0.4475 | MPLRKPPIPRLLLNNVSCMRNAQQILRHVNVSLHDGGALVLTGTNGSGKTTFLRMLAGFSRPSAGEILWNGHDITQSGIFHQYKLQLNWLSLKDAVKEKFTVLDNVQWFEVLEGKQGRSLPALEFMGLGRLANEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVKLLEYIIAEHRKKGGIVIVATHLTIDIEDAMILRLPPRFPRRMTLVDMLDRSDI | 228 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva05g00812 | 228 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 10 | 196 | IPR027417 | - | |
Bva05g00812 | 228 | TIGRFAM | ccmA: heme ABC exporter, ATP-binding protein CcmA | 13 | 209 | IPR005895 | GO:0017004|GO:0022857 | |
Bva05g00812 | 228 | PANTHER | ABC TRANSPORTER I FAMILY MEMBER 1 | 9 | 223 | IPR005895 | GO:0017004|GO:0022857 | |
Bva05g00812 | 228 | Pfam | ABC transporter | 26 | 166 | IPR003439 | GO:0005524 | |
Bva05g00812 | 228 | Gene3D | - | 8 | 207 | IPR027417 | - | |
Bva05g00812 | 228 | SMART | AAA_5 | 35 | 223 | IPR003593 | - | |
Bva05g00812 | 228 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 11 | 228 | IPR003439 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva05g00812 | Bva-Chr5 | 4078163 | 4079846 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva05g00812 | 24 | 178 | Calmodulin-binding Proteins | AT2G36910 | 27.485 | 2.06e-11 | 61.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva05g00812 | - | - | cpap:110815669 | 415.616 |