Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00806 ATGATTATGGAGGTCCAAAGGGCTAACTTGGTGGATGAACATGGAGCCACAGACCCATTCCCGGTGGGTATGCGTGTGTTGGCCGTTGACGATGACCCAATTTGTCTCAAAGTGTTGGAGAACTTGCTTCGCAAATGCCACTATCAGGTTACTACAACTAATCAGGCAATTAAGGCCCTGGACATGTTGAGGGAAGACACAGACAAATTTGACCTTGTTATTAGTGATGTAAACATGCCAGACATGGATGGTTTTAAGCTTCTTGAGCTTGTGGGACTTGAAATGGACCTACCTGTCATCATGTTGTCTGCACACAGTGATAAGAAGCTTGTGATGAAGGGTGTTACGCATGGTGCATGTGACTATTTGTTGAAACCTGTTCGAATTGAAGAGCTCAAGAACATATGGCAGCATGtaattagaagaaagaattttcatgttaaaaatCTGAATAAGGCGTTGAATGAGAATGTCTGCAATATGGCTGGGGAAGGTAATCAAGGTATTATATCAGAAAGTAATGCTGAtcgaaataaaaattttggtaaAAGACAGAAGGACCTAACTGAGGACGAGGAAGAAGATGGTGAAGAGAATGGACAAGAAAATGATGACCCCTCTACACAGAAGAAGCCTCGTGTGGTTTGGTCTGTTGAACTGCACAGGAAATTTGTTGCTGCAGTTAATCAACTGGGCCTCGAAAAGGCTTTTCCTAAGAAAATACTTGACCTGATGAATGTTGAAGGGCTGACAAGGGAAAATGTGGCCAGCCATCTACAGAAATATAGACTCTATCTGAAGAAAGCAACAAAGCAAGCTAACTTGGTTGCTGCATTGGGTACAAATGATTCCCCTTACTTGCGGATGGGCTCCCTAGAAGGTTTTAGAGATTTTCGCACCTTTTCTGGACCAGGAAGGCTCTCAAGCATAACACTTTCATCATATGCATCTAACGGAATGTTCAGTAGACTCAACTCCCCAGCCGGCTTGAACTTGAGGGGAATTAATTCTTCTGGACTCTCCGGACTGGCTCAATCTCAAAACATGAGCAATTCTATAAACACTGCTGGAAGCCAACAGCCATCGGTGTTCCCTGCAAATCAAAGCTCAAGTTTATTTCAGGGAGTTCCTTCGTCAGTAGAACTTAATCAGTCCCAACAAAGCAACTGTACAATTGATATTGGGCAGATAAGTCCAATTGATGATACAAATGGTTTTCCAGTTGCCACTAGCTTCCCAGACAGTAGAGTTGCCATTGGTAGTCCAAGCAATTATATCATGTTACAAGGAAACTCTCAACATACTTGTAATTCAGGAGCATTCAGAAATCAATCTTCTCTCAGAGACGCTTCATTAAATTCTGAGTCTTTTGACATTGGCGTTGGTTGTTCTTCTGATTTGTTGGATTACAGTCGTTGTAATGAACGCTGGCTGGATGCAGGTCAGTTATCAAAATTTCCTGCTAATCCTCTGCCACTGAGTGAGACTTTCAACAATGATCAGCTGCCCCCTAGTAGCTTAAACATTCCTTCCACCAGTCCTCGTATCGGTAACACTAACAACTTGGTTGATTTCTCTTCTGCAAGTGCAATTGCTATCCCATTGGAGGATGCTAGAGGCCCACAAGGCTTAATTGGGAATGTGGTCCAGCCTTCAAGTTACACTTCGCAGCAAAGATGGGAAGAACATGGACAAGATTACAACCCAAATATGAATCGTACTTTCAATTCCATGAATCCACTGCTTCCCTCTAATGGATTTACAAGTTCCTCAGTGCAGAGTTTCAACCAAAATAATGCAATATCAGGCAAAAGGGTCGATCCATTTTTGATTGGCCAATTGAGTCATCGAACTGAGTTTGAGAAATTCTCTTCGGACGCAAAGAAGTCAAGTGATACCTACATTTTGGAGCAGAGGAAATCCCAAGATGGTTTCATTCAGAATAAACTTGGATCCTTGGATGACATAATGAGTTCAATGGTCAAACGGGAGCAGAATGAGATGATATTGATGGATGGAGAAATGGGGTTTGACGCTTACCCTATTGGATCATGCATCTG 2060 0.418 MIMEVQRANLVDEHGATDPFPVGMRVLAVDDDPICLKVLENLLRKCHYQVTTTNQAIKALDMLREDTDKFDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSDKKLVMKGVTHGACDYLLKPVRIEELKNIWQHVIRRKNFHVKNLNKALNENVCNMAGEGNQGIISESNADRNKNFGKRQKDLTEDEEEDGEENGQENDDPSTQKKPRVVWSVELHRKFVAAVNQLGLEKAFPKKILDLMNVEGLTRENVASHLQKYRLYLKKATKQANLVAALGTNDSPYLRMGSLEGFRDFRTFSGPGRLSSITLSSYASNGMFSRLNSPAGLNLRGINSSGLSGLAQSQNMSNSINTAGSQQPSVFPANQSSSLFQGVPSSVELNQSQQSNCTIDIGQISPIDDTNGFPVATSFPDSRVAIGSPSNYIMLQGNSQHTCNSGAFRNQSSLRDASLNSESFDIGVGCSSDLLDYSRCNERWLDAGQLSKFPANPLPLSETFNNDQLPPSSLNIPSTSPRIGNTNNLVDFSSASAIAIPLEDARGPQGLIGNVVQPSSYTSQQRWEEHGQDYNPNMNRTFNSMNPLLPSNGFTSSSVQSFNQNNAISGKRVDPFLIGQLSHRTEFEKFSSDAKKSSDTYILEQRKSQDGFIQNKLGSLDDIMSSMVKREQNEMILMDGEMGFDAYPIGSCI 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00806 686 MobiDBLite consensus disorder prediction 185 211 - -
Bva05g00806 686 Pfam Myb-like DNA-binding domain 213 263 IPR001005 -
Bva05g00806 686 SMART REC_2 24 136 IPR001789 GO:0000160
Bva05g00806 686 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 208 267 IPR017930 -
Bva05g00806 686 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 211 264 IPR006447 GO:0003677
Bva05g00806 686 PIRSF RR_ARR_type-B 3 686 IPR017053 GO:0003677|GO:0003700|GO:0009736
Bva05g00806 686 SUPERFAMILY Homeodomain-like 208 268 IPR009057 -
Bva05g00806 686 SUPERFAMILY CheY-like 23 148 IPR011006 -
Bva05g00806 686 Pfam Response regulator receiver domain 26 134 IPR001789 GO:0000160
Bva05g00806 686 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 667 IPR045279 GO:0009736
Bva05g00806 686 CDD REC_typeB_ARR-like 26 140 - -
Bva05g00806 686 Gene3D - 207 269 - -
Bva05g00806 686 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 667 - -
Bva05g00806 686 Gene3D - 23 157 - -
Bva05g00806 686 ProSiteProfiles Response regulatory domain profile. 25 140 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00806 Bva-Chr5 4058152 4061904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00806 16 389 Response Regulator Gene Family AT2G25180 54.881 2.18e-123 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Bva05g00806 Response_reg 7.4e-25 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00806 K14491 - gmx:100776075 877.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00806 05 4058152 4061904 Bva05g00806 05 4058152 4061904 ECH