Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00786 ATGGATTTACGACCAATAAATGTTGAAGAATCACTCATGTCGCCGGGGTCTGGCATTTCCGAGATTAGCAGCCCTGGAGTGGTGCCGCTTTTTTATGCACCAGTTTCTGGTAATGGTCTTGTAAATGCTACATCCGTTGCTAGCCCGTGGTACGCTGGTGTACCAATTGGCTATCCCACTGTGAACGCTGCTGTTGGGTTTAGttataatcctaattttaccaATCGAGCTGGCGGTGGTAATGGTCTTGATCTTTCCAGCGCTGTGTCTCCAGCAACTGGTTATCTTTCAAATTCAGGTAGCTGTATAGGTGGAGTTAAGTGTTTAGATAAGACTGGCAATGATGCAGCAGATGGTCTTGGTTGTGGTGCTCTGCAGAGCTACAGGGTCATTGACAATACTTGTGATCAGGTAGGCAATATTCCACCAACTGGAATGCCATATAGTCTCACTATTGTCCAGCAAGCAACTGGGAATGGGGCTGATCAGGCTAGTGAGGAGGGTGGGGATGATTCTGTgtcagggaaaaaaattaagtttttatgtaGTTATGGTGGGAAGATTTTACCTAGACCTAGTGATGGAATGTTGAGATATGTTGGAGGGCAGACAAGGATTATTAGTTTTAGGAGAGATGTGAGCTTCAATGAACTGGCGCAGAAGATGGCTGACACATACGGCCAACCAGTGGTTATCAAGTATCAACTCCCCAACGAGGATTTTGATGCATTAATTTCTGTTTCATGCCCCGATGATCTCGAAAATATGTTGGATGAGtatgcaaaattaattgagcaaTCTCCGGATGGTTCAGCTAAATTAaggatttttctgttttctgctTCAGAGCTTGATGCTGCTTCTGGTATGATACAAATTGGAGATTTGCATAATAGTGGGCAGAGATATGTTGAGGCCGTGAATGGAATTACTGATGGGATTAGTGGTGGCATCCCAAGAAAGCAGAGTGTTGCAAGTGCAGCTTCAACCCAAAATTCTGATTTAAGTGCGACAGAAGTTCTTGATAACTCAATTCGTGGTCATGGGGAAATTAGCAGAGTGCCATCATCCTCCGTCTTATCACCTACGGGAAATTTGGCTGCTTCTCATGACAATGTTGCAAAATTAGTGATTGGGGATCACAGACCAGTAGCTTGCTCTGAGGATTCTGTGGTTCCATTGGGAATATCCACAGTTACATATGGTCCAACCCACACGTCATCTTTCCAGAATGAGGTTGTGTTAGAAAGGTCTGCCCCCATTACTTCATCCCAGCAGCAAATTGGATTGCAACAATCTAGAATGGACATTCCACCATCTGCACCTTATTTGCAACCTTTGTTTAATCCATACCCAGATGTAATGAACCGTGCAGATTACGTGCATCCACCTCCTCAGGTTGGCTTCCTTAATCCTCAGCCATTAGGGAAGGCTGGGCATGTCTTCACCCAACAACAGTTTTATGTCAGTACTGCAGGTTTAGCTTCTAATCAGGTCATCCCTACAATGCATGTGACAATGGCTACACCATCTTCCCATGTTGATGTAAGATCTAATGTTCTTCAATCAGTTCTGCAACCCCAGAAAAATCATTTGGTTCAATACACTGATGAAAGTAATTCAGGTTCGAGAACTGCATTCCAGGTTCAAGTTCCTCCCACAGTAGCAGTAGGTAATTTTGGCGGGGTCCAGGTTCCACCGCAGGAGCATCCCATTTTCCTAGATGGGTTGTCAGCTCATCAACCGGTAATGATCCCTGAGAAAATCCAAACAGTGGAGGACTGTTATATGTGTCAGAAAACATTGCCTCATGCACATTCAGATCCTGTGGCTCAGGATCAGCAGGATAGTAGTCCAGCTACAAGTTCTGATTTCATCCCAAGTTATCATATTCTCCCAATGCAGGAAAATTTAAAGGCTATGGAAACAAATCGAGTTATGATGACTGCACCCTTGAAGGAATGTGTCATCGAACAAGGGAATGGGACTAGACCCAAGGTGGTTAGCAAAATGGAACCTCTAGTTGGAGTACCTTTTACTGAAACAGCTGAACTTTCTCACAACCTTGAGCGACTACCTGAGCAAGATGGGCATTCTGCTCTCATGGGCATAACACCAATATCTTTAGATGTTGTTCAACAGTCTATGCTGCCGAATGAAAACTACTTTAAACAAGATGTTCTACAGAATAAAGGATCTCCAACTTCATTGTCTCCATCTGGGAAGCTTGGAGACGTGCAAGATTCTTCGAACTCGCTTTTCAGTAATAAAGATCCTTGGAACATGCACCATGAGGCTTGTTTTCCGCCTCCCAGACCTAACAAAGTTCcattgaagaaagaaacctCTTCTTCCAAAAATTACTTTGCTGAGAATCTGTTAGTCAACAATGAAGAACAAAGCCCGGAAGCTCAAGTGGAGGACACCCTCTGCCAGCCAttcaaacataatttaattttggaaaatgGGTCAACGGAAGACCAGATCAAACGAGAACTTAAAGTTGTTGCCGAAGGTGTTGCTGCATCTGTTTTGCAGTCAAGCACTCCTTCAAATCCTGACTTGAATGTTGGACATGTGTCCGGCcatgaaaatattgaagatgGAGATGTCCAAAACAATGTAATGGATGTACAAGCCAAAGCTCAgGATGTCAAGATCAAGCCACCAGAAATGGCATATCTTGGTTTTCCAGTATCAGATGGCCTTGGAAGATTGCAGGTTATAAAGAATTGTGACCTTGAAGAGTTGAGAGAATTAGGTTCTGGTACGTTTGGGACTGTCTATCATGGAAAATGGAGGGGAACTGATGTAGCAATCAAACGAATAAATGATAGATGTTTTGCTGGAAAGCCTTCAGAGCAAGAGCGCCTGAGAGCTGACTTCTGGAATGAGGCAATCAATCTTGCTGACTTGCACCATCCAAATGTGGTAGCTTTTTACGGTGTTGTGCTTGACGGGCCAGGGGGTTCTGTGGCAACAGTAACAGAGTACATGGTTAATGGTTCTCTTAAAAATGCCTTGCAAAAGAATGAGAGGAATCTTGACAGGCGAAAGCTTCTTTTGATTGCAATGGATGTGGCCTTCGGCATGGAGTATCTGCATGGAAAAAATATAGTACACTTTGACTTGAAAAGTGACAACTTGCTTGTGAATCTCCGAGATCCCCACCGCCCAATTTGCAAGGTTGGAGATTTGGGTCTATCCAAAGCGAAACATCAGACACTGATCTCTGGTGGTGTGCGAGGAACACTACCTTGGATGGCTCCAGAACTACTGAATGGAAGCAGTAACCTTGTTTCAGAGAAGGTGGATGTGTTTTCATTTGGGATTGTAATGTGGGAAGTCATCACTGGAGAAGAACCATATGCTAATTTGCATTACGGAACTATAATAGGTGGTATTTTGAACAACACTTTGAGGCCTCCGGTCCCAGAATCTTGTGATCCAGAATGGAAATCACTGATGGAGAGATGCTGGTCATCAGAGGCATCTCAAAGACCAAGCTTCACTGAAATTGCAAATCAATTACGCTCCATGGCAGCCAAGATTCCTCCCAAAGTACAAACTCAACAGCAGCAACTTGCTTA 3590 0.4248 MDLRPINVEESLMSPGSGISEISSPGVVPLFYAPVSGNGLVNATSVASPWYAGVPIGYPTVNAAVGFSYNPNFTNRAGGGNGLDLSSAVSPATGYLSNSGSCIGGVKCLDKTGNDAADGLGCGALQSYRVIDNTCDQVGNIPPTGMPYSLTIVQQATGNGADQASEEGGDDSVSGKKIKFLCSYGGKILPRPSDGMLRYVGGQTRIISFRRDVSFNELAQKMADTYGQPVVIKYQLPNEDFDALISVSCPDDLENMLDEYAKLIEQSPDGSAKLRIFLFSASELDAASGMIQIGDLHNSGQRYVEAVNGITDGISGGIPRKQSVASAASTQNSDLSATEVLDNSIRGHGEISRVPSSSVLSPTGNLAASHDNVAKLVIGDHRPVACSEDSVVPLGISTVTYGPTHTSSFQNEVVLERSAPITSSQQQIGLQQSRMDIPPSAPYLQPLFNPYPDVMNRADYVHPPPQVGFLNPQPLGKAGHVFTQQQFYVSTAGLASNQVIPTMHVTMATPSSHVDVRSNVLQSVLQPQKNHLVQYTDESNSGSRTAFQVQVPPTVAVGNFGGVQVPPQEHPIFLDGLSAHQPVMIPEKIQTVEDCYMCQKTLPHAHSDPVAQDQQDSSPATSSDFIPSYHILPMQENLKAMETNRVMMTAPLKECVIEQGNGTRPKVVSKMEPLVGVPFTETAELSHNLERLPEQDGHSALMGITPISLDVVQQSMLPNENYFKQDVLQNKGSPTSLSPSGKLGDVQDSSNSLFSNKDPWNMHHEACFPPPRPNKVPLKKETSSSKNYFAENLLVNNEEQSPEAQVEDTLCQPFKHNLILENGSTEDQIKRELKVVAEGVAASVLQSSTPSNPDLNVGHVSGHENIEDGDVQNNVMDVQAKAQDVKIKPPEMAYLGFPVSDGLGRLQVIKNCDLEELRELGSGTFGTVYHGKWRGTDVAIKRINDRCFAGKPSEQERLRADFWNEAINLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLKNALQKNERNLDRRKLLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKAKHQTLISGGVRGTLPWMAPELLNGSSNLVSEKVDVFSFGIVMWEVITGEEPYANLHYGTIIGGILNNTLRPPVPESCDPEWKSLMERCWSSEASQRPSFTEIANQLRSMAAKIPPKVQTQQQQLA 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00786 1196 PANTHER SERINE-THREONINE PROTEIN KINASE 146 312 - -
Bva05g00786 1196 SMART serkin_6 914 1180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00786 1196 SUPERFAMILY Protein kinase-like (PK-like) 907 1176 IPR011009 -
Bva05g00786 1196 CDD STKc_MAP3K-like 920 1177 - -
Bva05g00786 1196 CDD PB1_UP2 181 279 - -
Bva05g00786 1196 Pfam Protein tyrosine and serine/threonine kinase 915 1177 IPR001245 GO:0004672|GO:0006468
Bva05g00786 1196 Gene3D - 198 281 - -
Bva05g00786 1196 MobiDBLite consensus disorder prediction 608 625 - -
Bva05g00786 1196 MobiDBLite consensus disorder prediction 729 748 - -
Bva05g00786 1196 SMART PB1_new 192 281 IPR000270 GO:0005515
Bva05g00786 1196 SUPERFAMILY CAD & PB1 domains 193 285 - -
Bva05g00786 1196 Gene3D Phosphorylase Kinase; domain 1 907 1001 - -
Bva05g00786 1196 ProSiteProfiles Protein kinase domain profile. 914 1181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00786 1196 PRINTS Tyrosine kinase catalytic domain signature 1104 1126 IPR001245 GO:0004672|GO:0006468
Bva05g00786 1196 PRINTS Tyrosine kinase catalytic domain signature 1033 1051 IPR001245 GO:0004672|GO:0006468
Bva05g00786 1196 PRINTS Tyrosine kinase catalytic domain signature 1148 1170 IPR001245 GO:0004672|GO:0006468
Bva05g00786 1196 PRINTS Tyrosine kinase catalytic domain signature 996 1009 IPR001245 GO:0004672|GO:0006468
Bva05g00786 1196 Pfam PB1 domain 197 280 IPR000270 GO:0005515
Bva05g00786 1196 Gene3D Transferase(Phosphotransferase) domain 1 1002 1196 - -
Bva05g00786 1196 ProSitePatterns Protein kinases ATP-binding region signature. 920 951 IPR017441 GO:0005524
Bva05g00786 1196 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 627 1184 - -
Bva05g00786 1196 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 146 312 - -
Bva05g00786 1196 PANTHER SERINE-THREONINE PROTEIN KINASE 627 1184 - -
Bva05g00786 1196 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1039 1051 IPR008271 GO:0004672|GO:0006468
Bva05g00786 1196 MobiDBLite consensus disorder prediction 607 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00786 Bva-Chr5 3957004 3963124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00786 176 628 MAP Kinase Kinase Kinase AT3G46920 41.277 3.21e-87 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Bva05g00786 PK_Tyr_Ser-Thr 2.6e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00786 - - bvg:104901835 973.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00786 05 3957004 3963124 Bva06g00891 06 7721331 7727086 BWGD
Bva05g00786 05 3957004 3963124 Bva05g00786 05 3957004 3963124 ECH