Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00775 ATGGGATACCAAAGTCGGCGTCCTGCATGGTTGGAAGCTCTTCATACACAAAACTTTTTTGCGGAGTGCTCTTACCATGAAAACGCAAAGAAGAACATTTACTGCTTGGATTGTTGCACCAGTATTTGCCCACACTGCTTGCCTTCTCATCGCTTCCATATCCTTCTTCGGGTTCGTCGCTACGTCTATCGCGATGTCGTCAGATTGGAAGATCTTCGCAAACTCATTGACTGCTCCAATGTTCAGgcTTACACCATCAACAGTGCAAAAGTGGTGTTTATCAAGAAGAGACCTCAAAAGAGGCAATTCAAGGGGTCTGGAAACTGTTGCACCTCCTGCGATAGAACTCTCCAACAACCATTTATCCATTGCTCTCTAGATTGCAAGGTGGATTTTGTGCTGAAACACTACAAGGATCTGTCTCCCTACTTGAGAACCTGTAATTCATTGCAAGAGATGGGAGAGGATGAGATGACAAATGCAACGCCAAGTTCAACAATTGTGGACAGCGATGATGAATATGAGCCAATGAGCTCATCGTCTTCTGGCTCTCAGAATATGAGCACCACGCAGCCTTTTCTGCTCAGCACACAGATTAACGACCGCGACATGGCTACTAGCATGAATAGAAGAAAAGGCATTCCCCATAGATCTCCTCTCTGTTA 665 0.4511 MGYQSRRPAWLEALHTQNFFAECSYHENAKKNIYCLDCCTSICPHCLPSHRFHILLRVRRYVYRDVVRLEDLRKLIDCSNVQAYTINSAKVVFIKKRPQKRQFKGSGNCCTSCDRTLQQPFIHCSLDCKVDFVLKHYKDLSPYLRTCNSLQEMGEDEMTNATPSSTIVDSDDEYEPMSSSSSGSQNMSTTQPFLLSTQINDRDMATSMNRRKGIPHRSPLC 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00775 221 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 6 221 - -
Bva05g00775 221 ProSiteProfiles Zinc finger B-box type profile. 23 58 IPR000315 GO:0008270
Bva05g00775 221 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 6 221 - -
Bva05g00775 221 MobiDBLite consensus disorder prediction 155 189 - -
Bva05g00775 221 CDD Bbox2 23 53 - -
Bva05g00775 221 SUPERFAMILY B-box zinc-binding domain 21 62 - -
Bva05g00775 221 Pfam PLATZ transcription factor 59 130 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00775 Bva-Chr5 3904639 3905527 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Bva05g00775 PLATZ 2.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00775 - - rcu:8286601 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00775 05 3904639 3905527 Bva05g00775 05 3904639 3905527 ECH