Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00769 AtggggaagaaaaataaacaagtagGAGAAAAATCAAGTGATGATGGTAAAAATCCTACCAAAGTTGGAGATAGCAGCCCCAAAGCATATGATAGTGATAATATGGTATTTATATCCATGGCTCAAGAGTTGAAGGACGAGGGAAACAAGCTGTTCCAAAAGAGAGACCTTGGAGGAGCTatgttaaaatatgagaaagcCCTGAAACTGCTTCCAAGAAATCATATAGATGTGTCCCATCTGCGGAGTAACATGGCTGCCTGTTACATGCAGATGGGGCTAAGTGAGTACCCAAGGGCAATCCATGAATGTGATTTGGCTCTTGAAGTTACACCAAAATACAGTAAAGCGTTGTTGAAGAGGGCAAGGTGCTATGAGGCTTTGAATAGGCTGGATGTAGCTCTGAGAGATGTTAATGCTGTCTTGGCGATGGAGCCAAATAATGTCATGGCATTGGAGATTTTAGGAAGAGTTAAAAGTGCACTTGAGGAGAAGGGGTTAAGAGTAAATGATACAATAATTGAGTTGCCTTCAGATTATGTTGAACCTCCTCATGCTTCGTCATCGGTAAAAATAGTCAAAGAGAAGACAcgtaagaaaaagaacaaaaatgttGAGGTGGAAGCTGCTGATAAAATACTTGAAGGAGAACAAGTTGAGgagaaatttgaagagaaGAAGGATGAGGATGGTAATATGGACAAGAAAGTTGGGAAcaaatccaaaaagaaaaaggccaaGGAAAAAATTGATGAGAAGAAGGCTGATGTTAAGGAGGTTGTGgaggaaaaaattaatggcaGAAGGGAAGAAATGTCTAAGAAAACAGCAAAGCTTATTTTTGGTGAAGACATAAGATGGGCTGAATTGCCAGTTAATTTCAGCCTCCTGCAACTAAGAGAAGTTATCCTTGACAGATTCCCAAGTTTAGGAGCAGTTCTTGTCAAGTACAGGGACCCAGAAGGTGATTTGGTCACAATAACTTCTAATGAAGAACTAAGATTGGCAGAAACGTCAGCAGGATCACAGGGTTCTATACGGCTGTACATAGTGGAAGCTAGGCCTGATCAGGATACGTTCTTTGAGAAACTTAATGAAAGGGAGGTGCAAAAATTTGGTACTAATAATGCACCTGAGAATAGTTGTGGGgtaaaagcaaagcaaatgaTTAGCTCATCTTGCATTGAGGATTGGATAATCCGGTTTGCCCAACTGTTCAGGAATCATGTTGGTTTGGAATCTGATACATACTTGGATTTTCATGAACTCGGGATGAAGCTCTATTCTGAAGCGATGGAGGAGACAGTAACAAGTGAAGAGGCACAGCGCCTATTTGACCTGGCAGGGGACAAGTTCCAAGAGATGGCAGCTCTTGCATTGTTCAACTGGGGAAATGTTCACATGTCCAGGGCGAGGAAGAAGGTGTATTTCACAGAAGATTCTTCCGAAGAGAATCTGAATGAACAAATCAAAAGTGCATATGACTGGACACAGAAAGAATATAGAAAGGCcggagaaaaatatgaagaagcCATTACACTTAAATCAGATTTTTATGAAGGTTTTCTGGCACTAGGACAGCAGCAATTTGAGCAAGCAAAACTCTCTTGGTATTATGCAATCAGCAGCAATGTTGATTTAGCGACATGGCCCTCCACAGAGGTTCTGCAGCTTTACAACAATGCAGAGGAAAATATGGAGAAAGGAACGCGGTTGTGGGAAGATTCAGAGGAGCAGCGATTGAATGAAGCCACCAAATCAGGGGATGTCAAATTACTGATGCAGAACATGGGAATGGGAAGCCtgtttaaaaatatgtcaTCAGATGAAATTGCTTCTCAGGTGGCCAATATGAGGTCTCAAATAAATCTCATGTGGGGTACAATGTTATATGAGCGGTCAATTGTGGAATTCAAATTGGAGTTGCCAACGTGGCATGAAAGTCTGGAAGCTgctgttgagaagtttgaactTGCTGGAGCTTCTCCAACAGATATAGCTGTGATGTTGAAGAACCACTGTTCTAACAATACTGCTGTGGACGGTTTAGGATTCAAAATCGATGAAATAGTACAGGCCTGGAATGAGATGTACGAAGCTAAAAAGCTGATGAGAGTTGTTCCATCATTTCGCTTGGAGCCCTTATTTAGGAGGCGAGtgtcaaatatatatcatacCTTGGAGCTTGCGTG 2192 0.3818 MGKKNKQVGEKSSDDGKNPTKVGDSSPKAYDSDNMVFISMAQELKDEGNKLFQKRDLGGAMLKYEKALKLLPRNHIDVSHLRSNMAACYMQMGLSEYPRAIHECDLALEVTPKYSKALLKRARCYEALNRLDVALRDVNAVLAMEPNNVMALEILGRVKSALEEKGLRVNDTIIELPSDYVEPPHASSSVKIVKEKTRKKKNKNVEVEAADKILEGEQVEEKFEEKKDEDGNMDKKVGNKSKKKKAKEKIDEKKADVKEVVEEKINGRREEMSKKTAKLIFGEDIRWAELPVNFSLLQLREVILDRFPSLGAVLVKYRDPEGDLVTITSNEELRLAETSAGSQGSIRLYIVEARPDQDTFFEKLNEREVQKFGTNNAPENSCGVKAKQMISSSCIEDWIIRFAQLFRNHVGLESDTYLDFHELGMKLYSEAMEETVTSEEAQRLFDLAGDKFQEMAALALFNWGNVHMSRARKKVYFTEDSSEENLNEQIKSAYDWTQKEYRKAGEKYEEAITLKSDFYEGFLALGQQQFEQAKLSWYYAISSNVDLATWPSTEVLQLYNNAEENMEKGTRLWEDSEEQRLNEATKSGDVKLLMQNMGMGSLFKNMSSDEIASQVANMRSQINLMWGTMLYERSIVEFKLELPTWHESLEAAVEKFELAGASPTDIAVMLKNHCSNNTAVDGLGFKIDEIVQAWNEMYEAKKLMRVVPSFRLEPLFRRRVSNIYHTLELA 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00769 730 MobiDBLite consensus disorder prediction 221 237 - -
Bva05g00769 730 MobiDBLite consensus disorder prediction 1 30 - -
Bva05g00769 730 Gene3D Tetratricopeptide repeat domain 36 172 IPR011990 GO:0005515
Bva05g00769 730 ProSiteProfiles TPR repeat profile. 115 148 IPR019734 GO:0005515
Bva05g00769 730 MobiDBLite consensus disorder prediction 221 249 - -
Bva05g00769 730 Coils Coil 243 263 - -
Bva05g00769 730 CDD PB1 278 350 - -
Bva05g00769 730 MobiDBLite consensus disorder prediction 1 18 - -
Bva05g00769 730 SUPERFAMILY CAD & PB1 domains 275 362 - -
Bva05g00769 730 PANTHER PROTEIN PHOX3 3 729 - -
Bva05g00769 730 SUPERFAMILY TPR-like 40 163 IPR011990 GO:0005515
Bva05g00769 730 SMART PB1_new 274 353 IPR000270 GO:0005515
Bva05g00769 730 PANTHER PROTEIN CLMP1 3 729 IPR044517 -
Bva05g00769 730 ProSiteProfiles PB1 domain profile. 274 353 IPR000270 GO:0005515
Bva05g00769 730 ProSiteProfiles TPR repeat profile. 41 74 IPR019734 GO:0005515
Bva05g00769 730 Pfam PB1 domain 276 352 IPR000270 GO:0005515
Bva05g00769 730 Gene3D - 264 353 - -
Bva05g00769 730 SMART tpr_5 79 114 IPR019734 GO:0005515
Bva05g00769 730 SMART tpr_5 41 74 IPR019734 GO:0005515
Bva05g00769 730 SMART tpr_5 115 148 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00769 Bva-Chr5 3876640 3881068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00769 24 148 Calmodulin-binding Proteins AT3G25230 28.358 2.29e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00769 - - gmx:100778972 1011.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00769 05 3876640 3881068 Bva06g00913 06 7824406 7828359 BWGD
Bva05g00769 05 3876640 3881068 Bva05g00769 05 3876640 3881068 ECH