Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00731 ATGGAAAGTATGAAATCAGTGAAGCCACAACCTAAGAAGAATCTATGGAAGCCCGAAGAAGACTTGGTTCTGAAAGCTTACATTGAAGCTCATGGTGAAGGCAAATGGACTACCGTGTCCAAAAAGTCAGGGCTCAAGAGAGGAGGGAAGAGTTGCAGGTTAAGATGGAAAAACTACTTGAGACCTGATATTAAACGTGGAGACATGTCTCAAGAGGAAGAAGACCTTATTATCAGGCTGCATAAGCTTCTAGGCAACCGGTGGTCACTGATTGCCGGACGGCTTCCTGGTAGAACTGATAATGAAGTGAAAAATCACTGGAATACCTATTTGAACAAGAGAGGCAAAAAGAGAGTCATCGGTTCCAACAAGCATCAAGAAAGCAATAAGAAAATCCGGGCAGGTAATATTTCCAACGAAGCTTGCCGTCCGAATTCATCAAGCATTGCAGAAACAGGGATAGATGTAAggaaagaggagaaagaagagaggagTCACATGAAAAAGACAAACTCTTCGATGGACGAAACACAGAGCTTTGACTCTGGACTAGATTTTCCAATTGTGCCAGGAACTAGTGCAGTGTTCGGTTTTGAAGACCAGCCTTTCATGACCAACTTggactcttttttcttccttgaaGCATTAGATAGCGGATGGGTGGATCCTAATTCTCATTTGCAGTGGATCATGCCATA 698 0.4026 MESMKSVKPQPKKNLWKPEEDLVLKAYIEAHGEGKWTTVSKKSGLKRGGKSCRLRWKNYLRPDIKRGDMSQEEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEVKNHWNTYLNKRGKKRVIGSNKHQESNKKIRAGNISNEACRPNSSSIAETGIDVRKEEKEERSHMKKTNSSMDETQSFDSGLDFPIVPGTSAVFGFEDQPFMTNLDSFFFLEALDSGWVDPNSHLQWIMP 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00731 232 MobiDBLite consensus disorder prediction 157 171 - -
Bva05g00731 232 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Bva05g00731 232 Pfam Myb-like DNA-binding domain 14 60 IPR001005 -
Bva05g00731 232 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Bva05g00731 232 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Bva05g00731 232 SUPERFAMILY Homeodomain-like 12 107 IPR009057 -
Bva05g00731 232 MobiDBLite consensus disorder prediction 157 179 - -
Bva05g00731 232 Gene3D - 13 65 - -
Bva05g00731 232 Gene3D - 68 140 - -
Bva05g00731 232 CDD SANT 69 111 IPR001005 -
Bva05g00731 232 CDD SANT 16 60 IPR001005 -
Bva05g00731 232 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Bva05g00731 232 PANTHER TUBER-SPECIFIC AND SUCROSE-RESPONSIVE ELEMENT BINDING FACTOR 5 216 - -
Bva05g00731 232 SMART sant 12 62 IPR001005 -
Bva05g00731 232 SMART sant 65 113 IPR001005 -
Bva05g00731 232 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 5 216 - -
Bva05g00731 232 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00731 Bva-Chr5 3623641 3624480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00731 12 118 MYB Transcription Factor Family AT5G52600 76.636 2.40e-59 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva05g00731 Myb_DNA-binding 2.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00731 K09422 - zju:107404750 247.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00731 05 3623641 3624480 Bva05g00731 05 3623641 3624480 ECH