Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00730 ATGGAGCTCCAACTGGGTCTCGCTCTCCCGAGCAATCCTATTCCTACCAAACCCACCCTTGATGCTATGAACCTCTTGGGTTCCTTCCCTTGGAACCATGATTCTAGTTCAACCATCACCAATAAGCGTAGTTTTACCCAAGTTTGCAACTTTGAGCATCATAACAAACAGGCTCTGGTTCCAACTACTCTTTCTCTGCTACCATTAACTCCTTGCCACACAAATGATGATGACAATCTGGGCAACCACTCTACCATCACCAAGGCCGATGAGGATGATGCAGAAGAAGTGGTAGGTTGGCCACCAGTAAATTACTGGAGAAAGAAACTTCGCCAGGATAACTATGGTGTTCAAGTTGCAGAAAGTGAGGAACGAATTGTGATGGTTAATCGCAGTGGCTCTGATAACCTTAGAGGATCAAATAACAAGCTGTACGTGAAGGTGAAGATGGAGGGAGTAGGAATTGCACGAAAGATTGACCTCAGCTTGCACCGTTCTTTCGAGTCGCTTAAGGAAACATTGTTGGACATGTTCGGAAAATGTTATCAAGAGTATTCAAACAGCTATAAGCTGGCTTATCAGGACAAAGAAGGTGATTGGCTGCTTGCTGAAGATGTGCCATGGAGGCAAAAGTTTCGTTG 641 0.4493 MELQLGLALPSNPIPTKPTLDAMNLLGSFPWNHDSSSTITNKRSFTQVCNFEHHNKQALVPTTLSLLPLTPCHTNDDDNLGNHSTITKADEDDAEEVVGWPPVNYWRKKLRQDNYGVQVAESEERIVMVNRSGSDNLRGSNNKLYVKVKMEGVGIARKIDLSLHRSFESLKETLLDMFGKCYQEYSNSYKLAYQDKEGDWLLAEDVPWRQKFR 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00730 213 PANTHER AUXIN-RESPONSIVE PROTEIN IAA29 1 210 - -
Bva05g00730 213 Pfam AUX/IAA family 39 181 IPR033389 -
Bva05g00730 213 Pfam AUX/IAA family 187 209 IPR033389 -
Bva05g00730 213 ProSiteProfiles PB1 domain profile. 143 213 IPR000270 GO:0005515
Bva05g00730 213 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 1 210 IPR003311 GO:0005634|GO:0006355
Bva05g00730 213 Gene3D - 138 213 - -
Bva05g00730 213 SUPERFAMILY CAD & PB1 domains 139 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00730 Bva-Chr5 3617545 3618484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00730 132 210 B3 DNA Binding Superfamily AT3G61830 31.250 9.27e-08 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bva05g00730 AUX_IAA 3.6e-19 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00730 K14484 - gmx:100808466 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00730 05 3617545 3618484 Bva05g00730 05 3617545 3618484 ECH