Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00713 ATGTCGAGCTGCAGCGTCGATGTTGCGCCTGAGCAACTCTGCTACATCCCCTGCAACTTTTGCAACATTGTTCTTGCGGTGAGTGTTCCATGCAGCAGCCTATTTGACATCGTGACCGTTCGATGTGGGCACTGCACCAATCTATGGTCCGTGAACATGGCTGCAGCGTTTCAGTCACTGTCGTGGCAAGATGCTCAGGCACCTGGCTACTCCAATCCAGAGTATAGAATTGACACAGGCACCTCCTCCAAATGCAATAACAGGCTTGCAATGCGAGCACCCACCACACATGTAACTGAGGAAAGGGTTGTGAACCGACctCCCGAGAAGAGGCAGCGCGTACCTTCTGCATATAATCAGTTCATAAAGGAAGAGATTCAGAGGATCAAGGCCAATAATCCAGATATCAGTCACAGGGAAGCATTCAGTACTGCTGCTAAGAATTGGGCACACTTCCCTCACATTCATTTTGGACTGATGTTGGAGACCAACAATCAAGCTAAGCTGGACAATGGTTCTGAGAAGCATTTAATGTCAAGGGCTGCAGTGTTCAACAAGTg 560 0.4857 MSSCSVDVAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDAQAPGYSNPEYRIDTGTSSKCNNRLAMRAPTTHVTEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLETNNQAKLDNGSEKHLMSRAAVFNK 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00713 186 Pfam YABBY protein 9 159 IPR006780 GO:0007275
Bva05g00713 186 Gene3D High mobility group box domain 98 154 IPR036910 -
Bva05g00713 186 PANTHER PROTEIN YABBY 6-RELATED 1 176 IPR006780 GO:0007275
Bva05g00713 186 SUPERFAMILY HMG-box 103 152 IPR036910 -
Bva05g00713 186 PANTHER AXIAL REGULATOR YABBY 5 1 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00713 Bva-Chr5 3528681 3532244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00713 8 169 C2C2-YABBY Transcription Factor Family AT2G26580 77.778 1.12e-92 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bva05g00713 YABBY 1.6e-69 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00713 K25796 - gmx:100499942 366.311