Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00707 ATGGTGATGATTTGTAGCTCGATTACTGCTTGGATCAGTGACTTTTTCGCTTGCATGGGTGGTTGTTTTGGATGCTGCATAAAACCCACGCCAATTATAGCTGTGGATGAGCCTGCAAAGGGACTAAGAATTCAGGGGCAAACAGTGAGAAAACCAACCATATTAGATGACTTCTGGAGTTCCAGCACATGTGATCCAGAGAACAGTACCATTCAATCTCAAAGGAGCGTCTCCTCTGTCAGCAcattaaatcaaattctaTATCATAGCAGTGCCAATGCTACCTCAGGCACCCATTCTGATTTTGTAAACCAAGGTTTTCTTCTCTGGAATGAAAGCAGGCTTCACTGGATTGGAAGTGGCAAATCTAGGAAGCAGGGTCAACAAAAACGAGAATCCAGACTAAATTGGAATGCAACTTACGAAAATTTGCTAGGGACAAGACAACCTTTCCCCAAGCCAATACCTTTGTCTGAAATGGTTGAATTCCTAGTGGATGTTTGGGATCATGAAGGAATGTACGATTG 527 0.4213 MVMICSSITAWISDFFACMGGCFGCCIKPTPIIAVDEPAKGLRIQGQTVRKPTILDDFWSSSTCDPENSTIQSQRSVSSVSTLNQILYHSSANATSGTHSDFVNQGFLLWNESRLHWIGSGKSRKQGQQKRESRLNWNATYENLLGTRQPFPKPIPLSEMVEFLVDVWDHEGMYD 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00707 175 Pfam Protein of unknown function (DUF4050) 71 133 IPR025124 -
Bva05g00707 175 Pfam Protein of unknown function (DUF4050) 135 175 IPR025124 -
Bva05g00707 175 PANTHER DUF4050 FAMILY PROTEIN 1 175 - -
Bva05g00707 175 PANTHER OS07G0479600 PROTEIN 1 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00707 Bva-Chr5 3492596 3495663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00707 - - gmx:100812832 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00707 05 3492596 3495663 Bva08g02306 08 14955177 14958332 ECH
Bva05g00707 05 3492596 3495663 Bva10g00375 10 4225253 4229084 ECH
Bva05g00707 05 3492596 3495663 Bva06g02397 06 15414782 15418287 ECH
Bva05g00707 05 3492596 3495663 Bva05g00707 05 3492596 3495663 ECH