Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00690 ATGGATGGAAACAAGGACGATGCGTTGAAATGCTTGAAAATTGGGAAAGAGGCACTAGAAGCTGGGGATCGGGCCCGTGCTTTAAAGTTTGTGACTAAAGCTCGCCGTCTTGACCCGTCGTTGCAGGTGGACGATCTATTATCGGCGATAGAGAAGGATACTGGTGATCAACCTGCTGCAGCTGCCAACGGATCATCAGTTGCTTCTTCAGCCAAGCCCTCCGATCAACCTTCCCTCCGGCAGAGGGTTTCGTCAACTGGGTCTTCTTCATCTTCGTCATCAGCTTCATACACGGATGAGCAGATTACAATAGTCAGAGAAATTAGGAGGAAGAATAATTACTATGAGCTCTTGGGATTAGAGAAGAGTTGCACTGTTGAGGATGTACGAAAAGCTTATAGAAAATTGTCTTTGAAGGTTCATCCTGATAAGAACAAAGCACCCGGTGCTGAGGAAGCGTTTAAAGCTGTTTCCAAGGCATTTCAGTGTCTTAGTAATGAAGAGAGTCGGAAAAAGTATGATCTTGTGGGAGAAGATGAAGCTATTTACGAGAGACGTGCAACGAGGCAGCCACGAGCTTATAATGGATATTATGAGGCTGATATTGATGCCGAGGAGATATTTAGGAACTTCTTTGGTGGGATGGCTGCGACTGCAACTCCTTTTGGTGGCTTCAGTTTCGGACCAGGGATGGGTCCTAGGCCGGGTGGACACGGGTCTGGTGGCTTTAATGTTCGCTCTCTGATTCAGTTGCTACCTATTCTGCTTATTGtgcttttaaactttttaccATCCTCTGATCCTATCTACGTACTTTCTCGGTCCTATCCTTATGAATACCGATTTACCACCCCAAAGGGTGTCAATTATTATGTTAAGTCGACAAAGTTTGCTCAAGATTACCTGCCAGATAGTCCTGAACGCGCAACGATTGAAGACAAGGTCGAGAGGGAATACTTTGGCATTCTTGCACAGAATTGCCGGTTTGAGTTGCAGCGCCGACAATGGGGATATATCCAGGAAACACCACATTGTGACATGCTACGGAAGTTTGAGTCGACGAAGTG 1067 0.4555 MDGNKDDALKCLKIGKEALEAGDRARALKFVTKARRLDPSLQVDDLLSAIEKDTGDQPAAAANGSSVASSAKPSDQPSLRQRVSSTGSSSSSSSASYTDEQITIVREIRRKNNYYELLGLEKSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNEESRKKYDLVGEDEAIYERRATRQPRAYNGYYEADIDAEEIFRNFFGGMAATATPFGGFSFGPGMGPRPGGHGSGGFNVRSLIQLLPILLIVLLNFLPSSDPIYVLSRSYPYEYRFTTPKGVNYYVKSTKFAQDYLPDSPERATIEDKVEREYFGILAQNCRFELQRRQWGYIQETPHCDMLRKFESTK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00690 355 ProSiteProfiles dnaJ domain profile. 113 177 IPR001623 -
Bva05g00690 355 PANTHER AT29763P-RELATED 1 353 - -
Bva05g00690 355 Pfam Domain of unknown function (DUF1977) 264 335 IPR015399 -
Bva05g00690 355 SMART dnaj_3 112 169 IPR001623 -
Bva05g00690 355 Pfam DnaJ domain 113 174 IPR001623 -
Bva05g00690 355 ProSitePatterns Nt-dnaJ domain signature. 154 173 IPR018253 -
Bva05g00690 355 SUPERFAMILY Chaperone J-domain 110 227 IPR036869 -
Bva05g00690 355 MobiDBLite consensus disorder prediction 55 96 - -
Bva05g00690 355 PRINTS DnaJ domain signature 115 133 IPR001623 -
Bva05g00690 355 PRINTS DnaJ domain signature 149 169 IPR001623 -
Bva05g00690 355 PRINTS DnaJ domain signature 133 148 IPR001623 -
Bva05g00690 355 MobiDBLite consensus disorder prediction 59 96 - -
Bva05g00690 355 PANTHER - 1 353 - -
Bva05g00690 355 Gene3D DnaJ domain 110 221 IPR036869 -
Bva05g00690 355 CDD DnaJ 113 166 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00690 Bva-Chr5 3421366 3423368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00690 98 174 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.333 6.99e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00690 K09518 - gmx:100793797 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00690 05 3421366 3423368 Bva05g00690 05 3421366 3423368 ECH