Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00665 ATGGGCAGCTCCGAAAACGCTATCGGCGGCGGCCGTACCGCCGCTGTCGACAAGGATGTCGATTTCGCGAATTACTTTTGCACCTatgcttttctctttcaccAGAAGGAGATGCTCTCTGATCGGGTCCGAATGGACGCTTACTACAATGCCATTTTTGAGAACAAACATCACTTCAATGGAAAGGCTGTTTTGGATGTGGGAACTGGAAGTGGTATTCTTGCTATTTGGTCAGCACAAGCAGGCGCAAGGAAGGTATATGCAGTTGAAGCAACTAAGATGTCAGAACATGCCCGTGCCCTTGTCAAGGCAAATAATCTCGAACACGTGGTTGAAGTCATTGAGGGCTCCATGGAGGATGTTACCTTGCCAGAGAAAGTTGACGTCATTATTTCTGAGTGGATGGGATATTTTCTACTTCGTGAGTCCATGTTTGATTCAGTTATATGTGCTCGTGACCGCTGGCTCAAGCCAACAGGAGCAATGTATCCTAGTCATGCTCGAATGTGGTTTGCACCCATCAGGACTGGCATGGGAGAACGTAAACTGGGTGATTACCAGTCAGCTATGGATGATTGGTACAACTTTGTTGATGATACAAAAACCTACTATGGTGTTGATATGAGTGTTCTTACAAACCCTTTCTCTGAGGAGCAGAAGAAATACTACCTGCAGACATCATTATGGAACCATCTTCATCCACATCAAGTCATTGGAACAGCGGCTATAATAAAGGATATTGACTGTTTAACTGCCTCTGTGAGTGATATTGAGGAAGTGaggtcaaaattttctttgtcaatAACTATGGAAAACACAAAGCTATGCGGATTTGGAGGGTGGTTTGATGTCCACTTTCGGGGAAGAAGTGAGGATCCAGCTGCGCAAGAGATTATTTTAACTACTGCTCCTAGTATAGATTACAGTACACACTGGGGCCAACAGGTTTTCCTCTTGGATCCTCCAATTCGTGTCAGCGAAGGAGATAATTTAaatgcttcttttttaatgactCGTTCAAAGGAAAATCATCGACTGATGGAGGTTGAGCTGGGATATGAGATTCAACAACAATCTGGCAAGCTTCTTGCTCCTTTCAAAAATAAGTACTACATAGAATG 1121 0.4211 MGSSENAIGGGRTAAVDKDVDFANYFCTYAFLFHQKEMLSDRVRMDAYYNAIFENKHHFNGKAVLDVGTGSGILAIWSAQAGARKVYAVEATKMSEHARALVKANNLEHVVEVIEGSMEDVTLPEKVDVIISEWMGYFLLRESMFDSVICARDRWLKPTGAMYPSHARMWFAPIRTGMGERKLGDYQSAMDDWYNFVDDTKTYYGVDMSVLTNPFSEEQKKYYLQTSLWNHLHPHQVIGTAAIIKDIDCLTASVSDIEEVRSKFSLSITMENTKLCGFGGWFDVHFRGRSEDPAAQEIILTTAPSIDYSTHWGQQVFLLDPPIRVSEGDNLNASFLMTRSKENHRLMEVELGYEIQQQSGKLLAPFKNKYYIE 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00665 373 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 34 357 IPR029063 -
Bva05g00665 373 CDD AdoMet_MTases 64 163 - -
Bva05g00665 373 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE PRMT10 10 362 - -
Bva05g00665 373 Gene3D - 166 373 - -
Bva05g00665 373 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 10 362 IPR025799 GO:0016274|GO:0018216
Bva05g00665 373 Pfam Ribosomal protein L11 methyltransferase (PrmA) 60 133 - -
Bva05g00665 373 Gene3D Vaccinia Virus protein VP39 20 164 IPR029063 -
Bva05g00665 373 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 19 350 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00665 Bva-Chr5 3319714 3323655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00665 24 334 C2H2 Transcription Factor Family AT3G12270 33.434 6.85e-44 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00665 K11434 - gmx:100795134 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00665 05 3319714 3323655 Bva05g00665 05 3319714 3323655 ECH