Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00658 ATGGTGTCAGTGTGTGGCCAAGACCAAGAGCTTGAACTGTCAAGGGATGGCAGCCACTATAGTCTGTCCACTGGCATATTGCCTTCCCTTGGAGCCAGAAGCGGCCGCAGAATCAAGCTGAGAAGCTTCATTGTGTCCCCTTATGACCGCCGTTACAGGATATGGGAGACTTTCCTTGTTATTCTGGTGATCTACACTGCTTGGGTATCTCCCTTTGAATTCGGATTCCTTAAGAAACCAGCAGTGCCACTCTCCATTATTGACAACGTTGTGAATGGATTCTTTGCTGTTGATATAGTTCTCACCTTTTTCGTGGCCTACCTTGacaaaacaacatatttgtTGGTTGATGACACAAAAAAGATTGCCTGGAAATATGCAAGAACCTGGTTGGTCTTTGATATTGTTTCCACCATACCTTCAGAGCTTGCTCGCAAAATTTCACCTTCACCGCTCCGATCCTATGGCCTATTCAACATGCTTCGCCTTTGGCGTCTCCGAAGAGTCAGTGCACTGTTTAGTAGAATGGAGAAGGATAGAAACTATAACTATTTCTGGGTTCGATGTGCCAAGCTTATTTGTGTTACTCTTTTTGCGGTTCATTGTGCTGCATGCTTCTACTATCTTATTGCTGCAAGTTATCATGATCCAAAGAGAACATGGATTGGAGCAACAATGGGAAACTTCCTTGAACAGAGCTTGTGGATTCGATACGTGACATCAATTTACTGGTCTATTACCACTGTAACAACTGTCGGCTATGGGGATTTGCATCCCGTGAATTCAAGGGAGATGATATTTGACATCTTTTACATGCTTTTCAATCTTGGTCTAACGGCTTATTTGATTGGTAACATGACCAACTTGGTTGTCCATGGCACAAGTCGAACTAGAAAATTTAGAGACACCATACAAGCTGCCTCAAGTTTTGCACAAAGAAATCAATTGCCTGTTCGACTGCAAGACCAGATGCTTGCACATTTGTGCCTGAAGTTTAGAACAGACTCAGAGGGATTGCAGCAGCAAGAGACGCTTGATTCTCTTCCTAAAGCTATTAAATCAAGTATTTCACATCATCTTTTCTACGATCTTTTGGATAAGGTCTACTTGTTTCGGGGGGTTTCAAATGACTTGCTTTTTCAATTGGTATCGGAGATGAAAGCTGAGTACTTTCCACCCAAGGAGGATGTTATATTGCAGAATGAAGCCCCTATGGATTTCTATATACTAGTCACTGGTGCTGTGGACTTGATGGTTCTCAAAAATGGAGTTGAGCAGGTTGTTGGAGAAGCCAAAACTGGTGACCTTTGTGGTGAAATTGCGGTACTCTGTTATAGGCCACAACTTTTCACCGTAAGAACTAAAAGATTAAGCCAGCTGCTAAGGTTGAATCGTACAACATTCTTGAATATAGTTCAAGCCAATGTGGGAGATGGGACCATAATCATGAATAATCTCCTTCAGCATTTGAAAGAACTGAATGACCCAATTATGGAGAGAGTTTTGGTGGAGACAGAGAACATGGTAGCTCGTGGTAGAATGGACCTACCATTGAGTCTATGCTTTGCAGCACTCAGGGGAGATGACTTATTGTTGAACCAATTGTTGAAACGTGGTTTGGATCCAAATGAATCTGACAACGATGGAAGAACTGCTTTGCATATTGCAGCAGCTAAAGGAAGTGAGAACTGCGTGGTGCTTCTCTTAGACTTTGGGTCAGATCCCAATATCAGAGATTGTGAGGGAAATGTACCATTATGGGAAGCTCTACTCGGTGGTCATGAACCAGTGATAAAACACTTATTAGACTACGGTGCTAAATTGAGATATGGAGACGTGGGGAAATTTGCATGCACTGCAGCTGAACAAAACAATCTCAAGTTGCTCAAAGATATTATTCGCTACGGAGGAAATGTCACACTTGCCGGGAGCGATGGCAACACTGCTCTGCATGTAGCAGTTAGTGAAGGGAATGCCGAGATAGTGAAGTTCCTTTTGGATCAAGGAGCTGTCATTGACAAGCCAGAAATCCATGGTTGGACACCTAGAGACCTAGCGGACCAACAAGGACACGAGGAAATAAAAGCCATTTTTGAGTCCTTCGGAGAGCCCAAGGTTCAATCTTCTATTACAATACCAGAAAAACAGAGTAAGACAAAGTTCCTCGGGAGGTTTACAAGTGAGCCAACAATGCCCTTGTCCCAGGAAGGCTTGTTTCCCGGAACTGATCATGGGTCCTTTCGTCAGAGCCGTCCAAGAAGGAGGAGCAACAACTTCCATAACTCACTATTTGGGATGATGTCGGCGGCAAACAAAGGGAAAGGGGAGAGGGATTTACTCTTCCCCAGTAACTATAACAACGCAAGAAATGTTATCAACATTGGAGCTTGTGCTGGTGCAGCTAGAGTAACAATTAGTTGCCCTCAGAAAGATGAACTCGGTAGCAAGCTTGTGCTGCTACCACCTACTTTGAAGGAGTTGCTTGAGATGGGAGCCGACAAATTTGGTGTGGTTCCTACCAAGGTTATCACTGAAGATGGTGCTGAGGTTGATGACATGGATGTTATTAGAGACGGTGATCGTCTTCTTCTTGTCGCTGCAACTGTCACTGCCACATCACAATCCAACTCTTCAAAGGATGCCCAGGCGTCATG 2654 0.4371 MVSVCGQDQELELSRDGSHYSLSTGILPSLGARSGRRIKLRSFIVSPYDRRYRIWETFLVILVIYTAWVSPFEFGFLKKPAVPLSIIDNVVNGFFAVDIVLTFFVAYLDKTTYLLVDDTKKIAWKYARTWLVFDIVSTIPSELARKISPSPLRSYGLFNMLRLWRLRRVSALFSRMEKDRNYNYFWVRCAKLICVTLFAVHCAACFYYLIAASYHDPKRTWIGATMGNFLEQSLWIRYVTSIYWSITTVTTVGYGDLHPVNSREMIFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQLPVRLQDQMLAHLCLKFRTDSEGLQQQETLDSLPKAIKSSISHHLFYDLLDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPMDFYILVTGAVDLMVLKNGVEQVVGEAKTGDLCGEIAVLCYRPQLFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKELNDPIMERVLVETENMVARGRMDLPLSLCFAALRGDDLLLNQLLKRGLDPNESDNDGRTALHIAAAKGSENCVVLLLDFGSDPNIRDCEGNVPLWEALLGGHEPVIKHLLDYGAKLRYGDVGKFACTAAEQNNLKLLKDIIRYGGNVTLAGSDGNTALHVAVSEGNAEIVKFLLDQGAVIDKPEIHGWTPRDLADQQGHEEIKAIFESFGEPKVQSSITIPEKQSKTKFLGRFTSEPTMPLSQEGLFPGTDHGSFRQSRPRRRSNNFHNSLFGMMSAANKGKGERDLLFPSNYNNARNVINIGACAGAARVTISCPQKDELGSKLVLLPPTLKELLEMGADKFGVVPTKVITEDGAEVDDMDVIRDGDRLLLVAATVTATSQSNSSKDAQAS 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00658 884 ProSiteProfiles Ankyrin repeat profile. 548 580 IPR002110 GO:0005515
Bva05g00658 884 SMART ANK_2a 515 544 IPR002110 GO:0005515
Bva05g00658 884 SMART ANK_2a 548 577 IPR002110 GO:0005515
Bva05g00658 884 SMART ANK_2a 645 674 IPR002110 GO:0005515
Bva05g00658 884 SMART ANK_2a 581 610 IPR002110 GO:0005515
Bva05g00658 884 Pfam Ankyrin repeats (3 copies) 520 608 IPR002110 GO:0005515
Bva05g00658 884 Pfam Ankyrin repeats (3 copies) 620 694 IPR002110 GO:0005515
Bva05g00658 884 Pfam Ion transport protein 53 297 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bva05g00658 884 Pfam KHA, dimerisation domain of potassium ion channel 802 864 IPR021789 -
Bva05g00658 884 ProSiteProfiles Ankyrin repeat region circular profile. 645 673 - -
Bva05g00658 884 MobiDBLite consensus disorder prediction 732 759 - -
Bva05g00658 884 ProSiteProfiles Ankyrin repeat region circular profile. 548 579 - -
Bva05g00658 884 CDD CAP_ED 370 475 IPR000595 -
Bva05g00658 884 ProSiteProfiles Ankyrin repeat profile. 581 613 IPR002110 GO:0005515
Bva05g00658 884 SUPERFAMILY cAMP-binding domain-like 295 490 IPR018490 -
Bva05g00658 884 ProSiteProfiles Ankyrin repeat region circular profile. 581 608 - -
Bva05g00658 884 PRINTS EAG/ELK/ERG potassium channel family signature 238 255 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva05g00658 884 PRINTS EAG/ELK/ERG potassium channel family signature 65 72 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva05g00658 884 PRINTS EAG/ELK/ERG potassium channel family signature 264 275 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva05g00658 884 PRINTS EAG/ELK/ERG potassium channel family signature 99 108 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva05g00658 884 PRINTS EAG/ELK/ERG potassium channel family signature 282 291 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva05g00658 884 PRINTS EAG/ELK/ERG potassium channel family signature 88 98 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva05g00658 884 ProSiteProfiles Ankyrin repeat profile. 645 677 IPR002110 GO:0005515
Bva05g00658 884 PANTHER K+ TRANSPORTER 1-RELATED 2 874 - -
Bva05g00658 884 Gene3D - 54 291 - -
Bva05g00658 884 Gene3D Jelly Rolls 335 495 IPR014710 -
Bva05g00658 884 Gene3D - 516 699 IPR036770 -
Bva05g00658 884 Pfam Cyclic nucleotide-binding domain 390 474 IPR000595 -
Bva05g00658 884 SUPERFAMILY Voltage-gated potassium channels 47 291 - -
Bva05g00658 884 SUPERFAMILY Ankyrin repeat 519 702 IPR036770 -
Bva05g00658 884 ProSiteProfiles cAMP/cGMP binding motif profile. 370 472 IPR000595 -
Bva05g00658 884 ProSiteProfiles KHA domain profile. 802 882 IPR021789 -
Bva05g00658 884 PANTHER POTASSIUM CHANNEL AKT1 2 874 IPR045319 GO:0005249|GO:0006813
Bva05g00658 884 SMART cnmp_10 370 487 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00658 Bva-Chr5 3277008 3282487 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00658 12 864 Ion Channels AT2G25600 64.658 0.0 1117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00658 K21867 - qsu:112036350 1420.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00658 05 3277008 3282487 Bva05g00658 05 3277008 3282487 ECH