Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00657 ATGGTGGACGGCGCAGGAAAGAGAGGGCTGTTTAATACAGTGTCTGTGTGCGGCGAAGAGAATCATGATCATGAGGTTGAGTTGTCAATGGATGACAGTCACTATAGTCTCACCACTGGCATATTGCCTCCGCTTGGAGCCAGAAGCAATTGCAGAATCAAGCTTAGAACCTTCATTCTATCCCCTTACGACCGCCGTTACAGGATATGGCAAACTTTGCTTGTCATTCTGGTGATCTACACTGCTTGGGTGTCTCCATTTGAATTTGGATTCTTCGAAAAACCAGCACCGCCACTCTCTCATATTGACATCGTTGTGGATGCATTCTTTGCTGTAGATATAGTTCTTACCTTCTTCGTAGCTTACCTTGACAAAACTACCTACTTGTTGGAAGATGACCCAAGAAAGATTGCCAGAAAATATGCCAGTTCCTGGTTGTTCTTTGATGTTGTCTCTAGCATTCCTTCAGAGCTTGAACGTAAAATGTTACCTGAATCTCTCCGATCCTATAACCTATTCTCCATGCTTCGCCTTTGGCGTCTCCGAAGAGTCAGTGCACTGTTTAGAAGATTGGAGAAGGACAGAAAGTATAACTATTTCTGGATTCGATGTGCCAAGCTTATCTGTGTTACCCTTTTTGCGGTTCACTGTGCAGCATGCTTCTACTATCTTATTGCGGCCCGTTATCATGATCCTGGGAAAACGTGGTTTGGAACAGAAGACTTCCTTGAACATAGCTTGGGGACGCGTTATGTAACATCAGTTTACTGGTCTATTACCACTCTAACGACTGTTGGCTACGGAGATTTGCATCCTGTGAATTGTAGAGAGAAGATATTTGGCatcttttatatgtttttcaaTCTTGGATTAACTGCTTATTTGATCGGAAACATGACCAATTTAGTTGTACATGACACCAGCCGAACTAGAAAATTTAGGGATACCATACATGCTGCCTCAAGTTTTGCACAAAGGAATCGATTGCCTGTTCGACTGCAAGAGCAGATGCTTGCACATTTGTGCTTGAAATTCAGAACAGACTCGGAGGGATTACAGCAGCAAGAGACCCTTGATTCCCTTCCTAAAGCTATTAGATCAAGCATTTCACATCATCTTTTTTACGATCTTCTGGATAATGTCTACTTGTTTCGTGAAGTTTCAAAGGACTTGATTTTTCAACTgGTCTCAGAGATGAAAGCTGAGTACTTTCCTCCTAAAGAAGATGTTATCTTGCAAAATGAAGCGCCCACAGACTTTTATATACTAGCTTCCGGTGCTGTGGACCTGATAGTTCACAAAGCAAATGGTGTTGAAGAGGTTATTGGAGAAGGAAAAACTGGTGATCTATGTGGTGAAATTGGAGTCCTTTGTTATAGGCCGCAACTCTTTACAGTGCGAACCAAACGTTTAAGCCAGCTACTAAGGCTGAACCGTACTGTTTTTGTGAACATTGTTCAAGCCAATGTAGGAGATGGGACCATTATCATGAGCAATCTCCTTCAGCATTTGAAAGAGTTCAAGCATCCCCTCTTGGAGGGAGTTCTAGTTGAGACGGAGAAAATATTAGTTCGTGGTAGAATGGACCTACCACTGAGTCTGTGTTTTGCAGCACTCAGGGAAGATGACTTATTGTTGAATCAATTGTTGAAACGAGGTTTGGACCCAAATGAAACTGACAACAACGGAAGAACAGCTTTACATATTGCAGCATCTAAAGGAAATGATAGGTGTGTCATGCTTCTGCTGGATTCTGGGGCAGATCCCAACATTAAAGATTCTTATGGAAATGTACCACTGTGGGAGGCTTTACTAGGTGGTCGTGAATCAGTAAGAAACCTCTTAGTAAACAATGGTGCTAAGTTGCAAAATGGAGATGGGGGTCATTTTTCGTGCATTGCCACAGAACAAAACAATCTCAAGTTGCTCAGTGACATTGTTCACTGCGGAGGAGATGTTACCCTTCCTATTAGCAATGGGAACACTGCTCTGCATGCTGCAGTATGTGAAGGCAATGCTGAGATAGTGAAGTTCCTTTTGGACCACGGGGCAGATATTGACAAACCAAACATCCATGGTTGGACCCCTAGAGATCTCGCAGACCAACAAGGacatgaagaaataaaaaccattTTTGAATCCTTTGGAAAGCCAAAGGTTCAATCTGTTACTCTAATGCCTGAGAAAGAGAGTAGGATAAAATTTCTTGGAAGGTTTCCCAGTGAGCCAACAATGCCATTGTCCAAGGAAAGCTCATTTCCAGGAACTGATGGATCATTTACCCAAAGTCGTCCAAGTAGGAGGAGTAATAGCTATGATAACTCAATATTTGGGGTGATGTCAGCAGCTCACAAAGGTGAGAAGGATTTCTTATTCCCTCTTAAGATCAACAATACCAGATGTATGAAACGTGATGATTGTGCAGCTAGAGTAACAATTAGTTGCCCTGAAAAGGGTCATGTTGGTGGGAAGCTTGTGTTGCTGCCAGGGAGTTTCGAGGAGCTACTTGTGATTGGAGCTGAGAAATTTGGAGTATTTCCTACCAAGGTTGTGAGCAAAGACGGAGCAGAAATTGAATGCATAGAGGTGATTAGAGATGGCGATCATCTTGTTTTTGTAAGTGCTAGTGGCGCACCAGAATCCAATTGTTTTCACGGATCTTg 2663 0.4221 MVDGAGKRGLFNTVSVCGEENHDHEVELSMDDSHYSLTTGILPPLGARSNCRIKLRTFILSPYDRRYRIWQTLLVILVIYTAWVSPFEFGFFEKPAPPLSHIDIVVDAFFAVDIVLTFFVAYLDKTTYLLEDDPRKIARKYASSWLFFDVVSSIPSELERKMLPESLRSYNLFSMLRLWRLRRVSALFRRLEKDRKYNYFWIRCAKLICVTLFAVHCAACFYYLIAARYHDPGKTWFGTEDFLEHSLGTRYVTSVYWSITTLTTVGYGDLHPVNCREKIFGIFYMFFNLGLTAYLIGNMTNLVVHDTSRTRKFRDTIHAASSFAQRNRLPVRLQEQMLAHLCLKFRTDSEGLQQQETLDSLPKAIRSSISHHLFYDLLDNVYLFREVSKDLIFQLVSEMKAEYFPPKEDVILQNEAPTDFYILASGAVDLIVHKANGVEEVIGEGKTGDLCGEIGVLCYRPQLFTVRTKRLSQLLRLNRTVFVNIVQANVGDGTIIMSNLLQHLKEFKHPLLEGVLVETEKILVRGRMDLPLSLCFAALREDDLLLNQLLKRGLDPNETDNNGRTALHIAASKGNDRCVMLLLDSGADPNIKDSYGNVPLWEALLGGRESVRNLLVNNGAKLQNGDGGHFSCIATEQNNLKLLSDIVHCGGDVTLPISNGNTALHAAVCEGNAEIVKFLLDHGADIDKPNIHGWTPRDLADQQGHEEIKTIFESFGKPKVQSVTLMPEKESRIKFLGRFPSEPTMPLSKESSFPGTDGSFTQSRPSRRSNSYDNSIFGVMSAAHKGEKDFLFPLKINNTRCMKRDDCAARVTISCPEKGHVGGKLVLLPGSFEELLVIGAEKFGVFPTKVVSKDGAEIECIEVIRDGDHLVFVSASGAPESNCFHGS 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00657 887 SUPERFAMILY cAMP-binding domain-like 308 504 IPR018490 -
Bva05g00657 887 MobiDBLite consensus disorder prediction 745 769 - -
Bva05g00657 887 MobiDBLite consensus disorder prediction 739 769 - -
Bva05g00657 887 SMART ANK_2a 659 688 IPR002110 GO:0005515
Bva05g00657 887 SMART ANK_2a 595 624 IPR002110 GO:0005515
Bva05g00657 887 SMART ANK_2a 529 558 IPR002110 GO:0005515
Bva05g00657 887 SMART ANK_2a 562 591 IPR002110 GO:0005515
Bva05g00657 887 Pfam Cyclic nucleotide-binding domain 403 488 IPR000595 -
Bva05g00657 887 ProSiteProfiles Ankyrin repeat profile. 659 691 IPR002110 GO:0005515
Bva05g00657 887 ProSiteProfiles Ankyrin repeat region circular profile. 659 687 - -
Bva05g00657 887 Pfam KHA, dimerisation domain of potassium ion channel 810 872 IPR021789 -
Bva05g00657 887 Pfam Ion transport protein 68 310 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bva05g00657 887 PRINTS EAG/ELK/ERG potassium channel family signature 80 87 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva05g00657 887 PRINTS EAG/ELK/ERG potassium channel family signature 295 304 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva05g00657 887 PRINTS EAG/ELK/ERG potassium channel family signature 277 288 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva05g00657 887 PRINTS EAG/ELK/ERG potassium channel family signature 103 113 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva05g00657 887 PRINTS EAG/ELK/ERG potassium channel family signature 114 123 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva05g00657 887 PRINTS EAG/ELK/ERG potassium channel family signature 251 268 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva05g00657 887 PANTHER K+ TRANSPORTER 1-RELATED 13 876 - -
Bva05g00657 887 PRINTS Ankyrin repeat signature 563 578 IPR002110 GO:0005515
Bva05g00657 887 PRINTS Ankyrin repeat signature 675 689 IPR002110 GO:0005515
Bva05g00657 887 SUPERFAMILY Voltage-gated potassium channels 62 304 - -
Bva05g00657 887 Gene3D - 530 713 IPR036770 -
Bva05g00657 887 Gene3D Jelly Rolls 347 508 IPR014710 -
Bva05g00657 887 PANTHER POTASSIUM CHANNEL AKT1 13 876 IPR045319 GO:0005249|GO:0006813
Bva05g00657 887 Gene3D - 70 304 - -
Bva05g00657 887 CDD CAP_ED 383 489 IPR000595 -
Bva05g00657 887 ProSiteProfiles Ankyrin repeat region circular profile. 562 593 - -
Bva05g00657 887 SMART cnmp_10 383 501 IPR000595 -
Bva05g00657 887 ProSiteProfiles cAMP/cGMP binding motif profile. 383 486 IPR000595 -
Bva05g00657 887 ProSiteProfiles KHA domain profile. 810 887 IPR021789 -
Bva05g00657 887 ProSiteProfiles Ankyrin repeat profile. 562 594 IPR002110 GO:0005515
Bva05g00657 887 SUPERFAMILY Ankyrin repeat 533 714 IPR036770 -
Bva05g00657 887 Pfam Ankyrin repeats (3 copies) 633 708 IPR002110 GO:0005515
Bva05g00657 887 Pfam Ankyrin repeats (3 copies) 534 623 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00657 Bva-Chr5 3271692 3275991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00657 33 872 Ion Channels AT2G25600 61.584 0.0 1045
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00657 K21867 - zju:107432387 1285.01