Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00649 ATGACGATTGATGACGAaagttctatatatattggagGACTTCCCTACGACGCCACCGAAGATAATCTTCACACTGTCTTTGATTTGTATGGCGCCATTGTTGACATCAAGATTATTAATGATCAACGGACAAGGGGCAAATGTTATGGTTTTATTACTTTCACAAATCCAAGGTCTGCAGTGGATGCAATCAATGACATGAATGGGAGAAATGGAGACTGGGATCGCAGTAGAGGTCGAGACAGAGATTACAATCATGATCGTGATAAAGATAGGAATAGAAATGCTCTGGTTGATACAGCGACGTTGGAGGGTGATGATGATGGTGACGGTGATGCTATGGGCTTAAAGGATGGACAATTCACTATTGGAAACGCGTG 380 0.4079 MTIDDESSIYIGGLPYDATEDNLHTVFDLYGAIVDIKIINDQRTRGKCYGFITFTNPRSAVDAINDMNGRNGDWDRSRGRDRDYNHDRDKDRNRNALVDTATLEGDDDGDGDAMGLKDGQFTIGNA 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00649 126 MobiDBLite consensus disorder prediction 66 114 - -
Bva05g00649 126 CDD RRM_SF 9 73 - -
Bva05g00649 126 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 89 IPR000504 GO:0003723
Bva05g00649 126 PANTHER TRANSFORMER-2-RELATED 1 70 - -
Bva05g00649 126 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDA ISOFORM X1 1 70 - -
Bva05g00649 126 SUPERFAMILY RNA-binding domain, RBD 4 71 IPR035979 GO:0003676
Bva05g00649 126 SMART rrm1_1 8 78 IPR000504 GO:0003723
Bva05g00649 126 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 71 IPR000504 GO:0003723
Bva05g00649 126 MobiDBLite consensus disorder prediction 69 97 - -
Bva05g00649 126 Gene3D - 2 115 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00649 Bva-Chr5 3239740 3242245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00649 7 73 Eukaryotic Initiation Factors Gene Family AT2G23350 32.836 1.19e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00649 - - gmx:100816804 136.346
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00649 05 3239740 3242245 Bva05g00649 05 3239740 3242245 ECH