Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00645 ATGGCGGTGGTTTTTGCCGCTTGGAGAGTGATGGTTGTGGTCTTCATTCTGGTTCTGCGACTGAGTTGGCCAGTCAGAACGGAGCCCGCCCAGGATAAGCAAGCTCTCCTTGCTTTCATCTCTCAAACCCCACATGCCAATCGTATTAAGTGGAACGAATCCGACTCGGCCTGCAACTGGGTGGGAGTGGAATGCGATGCTGCACGTTCCTTTGTTTATTCTCTTCGTCTTCCCGGTGTTGGCCTTGTGGGTCGGATTCCGCCTGACACAATCGGCCGTCTCACTCAGCTAAGAGTTCTCAGTCTCCGTTCTAATGGTCTCATCGGCGAGATCCCCGACGATTTCTCCAATTTGACGTTACTTCGCAGCCTCTATCTCCAGGATAACCAGTTCTCCGGCGAGTTCCCCGCCTCGCTGACTCGGTTGTCTCGTTTGACACGGCTAGATCTTTCTTCAAACAACTTTACGGGCAGAGTCCCTTTCTCCATCAACAATTTGACCCACCTGAGCGGTCTTTTCTTGGAAAACAATGGATTCTCTGGTAGCCTGCCAAGCATTGCCGCCAATTTGGCAAACTTCAATGTCTCCAATAACCAGCTTAATGGTTCGATTCCCCAAACCCTTTCGAAATTCCCCGCATCCTCATTCGCTGGAAACTTAGATCTCTGTGGAGCACCATTGCAACCATGCAACCCATTCTTCCCAGCTCCAGCCCCATCACCGTCCGGCGTTTTGCCCGTTGCCCCAGTTCACAAGAAGTCCAAGAAGCTTTCAACAGGTGCCATTATCGGAATTGCAGTTGGTTCTGCTCTGTTTCTCTTGTTATTATTGCTCCTTCTCTTCCTATGCCTCCGGAAGCGCCAGAGTCGGGCACCCCCGAAGCCACCGAAGCCAGTGGCTACAGCTCGCGCTGCACCGGCGGAGGCCGGAACCTCATCTTCGAAAGATGATATCACAGGTGGGTCTGTGGAGGCTGAGAGGAACAAGCTAGTGTTCCTGGAAGGTGGAATATATAGTTTTGATTTGGAGGATTTGCTGAGGGCTTCTGCGGAAGTTTTGGGTAAGGGAAGCGTGGGTACTTCTTACAAGGCCGTGTTGGAGGAAGGGACAACGGTGGTGGTAAAGAGGTTGAAGGATGTAGGCGTTCAGAAGAGAGAGTTCGAGACGCAAATGGAGGTTCTGGGAAAGATTAAGCACGAGAATGTGGTTCCTCTCAGAGCATTTTACTACTCTAAGGACGAGAAATTGCTAGTTTACGATTACATGCCTACCGGTAGCTTATCTGCTCTCCTTCACGGGAGCAGGGGGTCAGGGCGGACGCCACTGGACTGGGATAACCGGATGAGAATAGCGCTAGGAACCGCAAGAGGTCTTGCCCACCTACACGTGTCCGGAAATGTGGTCCACGGCAATATAAAATCTTCCAACATCCTCCTCAAATCTGACCACGAAGCTAGCGTTTCGGACTTCGGCCTGAACCCACTATTCGGCAATTCCACCCCATCCAACCGGGTGGCGGGCTATCGGGCCCCCGAAGTTTTGGAAACCCGCAAAGTGACCTTCAAGTCTGACGTGTACAGCTTCGGTGTATTGCTGTTGGAGCTATTAACAGGGAAGGTGCCCAACCAAGCTTCTTTGGGCGAAGAGGGAATTGATCTTCCAAGGTGGGTCCAATCCGTGGTTCGCGAAGAATGGACGGCTGAGGTGTTTGACGCTGAGCTTATGAGGTATCACAACATTGAGGAAGAGATGGTTCAGCTATTGCAGATAGCGATGGCGTGTGTTTCGGTGGTGCCTGATCAGAGACCGAGTATGCAAGAGGCGGTGCGTATGATTGAGGATATGAATAGAGGTGAGACCGATGATGGCTTACGACAGTCATCGGATGATCCATCGAAAGGATCCGACGGTCATACGCCGCCTGCTGAGTCAAGGACTCCACCAAGCTCCATCACACCTTA 1961 0.5191 MAVVFAAWRVMVVVFILVLRLSWPVRTEPAQDKQALLAFISQTPHANRIKWNESDSACNWVGVECDAARSFVYSLRLPGVGLVGRIPPDTIGRLTQLRVLSLRSNGLIGEIPDDFSNLTLLRSLYLQDNQFSGEFPASLTRLSRLTRLDLSSNNFTGRVPFSINNLTHLSGLFLENNGFSGSLPSIAANLANFNVSNNQLNGSIPQTLSKFPASSFAGNLDLCGAPLQPCNPFFPAPAPSPSGVLPVAPVHKKSKKLSTGAIIGIAVGSALFLLLLLLLLFLCLRKRQSRAPPKPPKPVATARAAPAEAGTSSSKDDITGGSVEAERNKLVFLEGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVGVQKREFETQMEVLGKIKHENVVPLRAFYYSKDEKLLVYDYMPTGSLSALLHGSRGSGRTPLDWDNRMRIALGTARGLAHLHVSGNVVHGNIKSSNILLKSDHEASVSDFGLNPLFGNSTPSNRVAGYRAPEVLETRKVTFKSDVYSFGVLLLELLTGKVPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRYHNIEEEMVQLLQIAMACVSVVPDQRPSMQEAVRMIEDMNRGETDDGLRQSSDDPSKGSDGHTPPAESRTPPSSITP 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00645 653 PANTHER OS05G0588300 PROTEIN 14 633 - -
Bva05g00645 653 MobiDBLite consensus disorder prediction 289 320 - -
Bva05g00645 653 Pfam Protein kinase domain 350 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00645 653 Gene3D Ribonuclease Inhibitor 190 230 IPR032675 -
Bva05g00645 653 Gene3D Ribonuclease Inhibitor 29 187 IPR032675 -
Bva05g00645 653 SUPERFAMILY Protein kinase-like (PK-like) 351 612 IPR011009 -
Bva05g00645 653 SUPERFAMILY L domain-like 51 216 - -
Bva05g00645 653 ProSiteProfiles Protein kinase domain profile. 347 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00645 653 MobiDBLite consensus disorder prediction 613 653 - -
Bva05g00645 653 PANTHER OS05G0480400 PROTEIN 14 633 - -
Bva05g00645 653 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Bva05g00645 653 Pfam Leucine rich repeat 83 131 IPR001611 GO:0005515
Bva05g00645 653 MobiDBLite consensus disorder prediction 613 632 - -
Bva05g00645 653 Gene3D Phosphorylase Kinase; domain 1 316 421 - -
Bva05g00645 653 Gene3D Transferase(Phosphotransferase) domain 1 422 633 - -
Bva05g00645 653 CDD STKc_IRAK 353 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00645 Bva-Chr5 3212672 3215769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00645 32 638 Receptor kinase-like Gene Family AT5G58300 54.383 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva05g00645 Pkinase 6.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00645 - - cpap:110818580 1028.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00645 05 3212672 3215769 Bva05g00645 05 3212672 3215769 ECH